Index

_

__call__() (pybop.applications.gitt_methods.GITTFit method) (pybop.applications.gitt_methods.GITTPulseFit method) (pybop.applications.ocp_methods.OCPAverage method) (pybop.applications.ocp_methods.OCPCapacityToStoichiometry method) (pybop.applications.ocp_methods.OCPMerge method) (pybop.costs.error_measures.ErrorMeasure method) (pybop.costs.error_measures.MeanAbsoluteError method) (pybop.costs.error_measures.MeanSquaredError method) (pybop.costs.error_measures.Minkowski method) (pybop.costs.error_measures.RootMeanSquaredError method) (pybop.costs.error_measures.SumOfPower method) (pybop.costs.error_measures.SumSquaredError method) (pybop.costs.feature_distances.FeatureDistance method) (pybop.costs.log_likelihoods.GaussianLogLikelihood method) (pybop.costs.log_likelihoods.GaussianLogLikelihoodKnownSigma method) (pybop.ErrorMeasure method) (pybop.GaussianLogLikelihood method) (pybop.GaussianLogLikelihoodKnownSigma method) (pybop.GITTFit method) (pybop.GITTPulseFit method) (pybop.Interpolant method) (pybop.InverseOCV method) (pybop.MeanAbsoluteError method) (pybop.MeanSquaredError method) (pybop.Minkowski method) (pybop.models.lithium_ion.utils.Interpolant method) (pybop.models.lithium_ion.utils.InverseOCV method) (pybop.OCPAverage method) (pybop.OCPCapacityToStoichiometry method) (pybop.OCPMerge method) (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) (pybop.plot.standard_plots.StandardPlot method) (pybop.plot.standard_plots.StandardSubplot method) (pybop.plot.StandardPlot method) (pybop.plot.StandardSubplot method) (pybop.Problem method) (pybop.problems.problem.Problem method) (pybop.RootMeanSquaredError method) (pybop.SumOfPower method) (pybop.SumSquaredError method) __contains__() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) __getattr__() (pybop.FailedSolution method) (pybop.simulators.failed_solution.FailedSolution method) __getitem__() (dataset.Dataset method) (pybop.FailedSolution method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.simulators.failed_solution.FailedSolution method) (pybop.simulators.solution.Solution method) (pybop.Solution method) __getstate__() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) __iter__() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) __len__() (pybop.costs.evaluation.Evaluation method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) __name__ (pybop.costs.error_measures.Minkowski property) (pybop.Minkowski property) __name__() (pybop.costs.error_measures.SumOfPower method) (pybop.SumOfPower method) __post_init__() (pybop.FailedVariable method) (pybop.parameters.parameter.Bounds method) (pybop.simulators.failed_solution.FailedVariable method) __repr__() (dataset.Dataset method) (pybop.Distribution method) (pybop.Exponential method) (pybop.JointDistribution method) (pybop.Parameter method) (pybop.Parameters method) (pybop.parameters.distributions.Distribution method) (pybop.parameters.distributions.Exponential method) (pybop.parameters.distributions.JointDistribution method) (pybop.parameters.distributions.Uniform method) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution method) (pybop.parameters.parameter.Parameter method) (pybop.parameters.parameter.Parameters method) (pybop.Uniform method) __setitem__() (dataset.Dataset method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) __setstate__() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) __str__() (pybop._result.Result method) (pybop.Result method) __version__ (in module pybop) (in module pybop._version) _add() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) _add_single_sigma() (pybop.costs.log_likelihoods.GaussianLogLikelihood method) (pybop.GaussianLogLikelihood method) _alpha (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _append_transformation() (transformations.ComposedTransformation method) _ask_for_samples() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _autocorrelate_negative() (pybop.samplers.base_sampler.SamplingResult method) _b1 (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _b1t (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _b2 (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _b2t (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _best_cost (pybop._result.Result attribute) (pybop.Result attribute) _best_run (pybop._result.Result attribute) (pybop.Result attribute) _boundaries (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers.IRPropPlusImpl attribute) _bounds (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) _built (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins attribute) (pybop.models.lithium_ion.WeppnerHuggins attribute) _bulk_update_initial_values() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) _calculate_statistics() (pybop.samplers.base_sampler.SamplingResult method) _catch_errors() (pybop.pybamm.eis_simulator.EISSimulator method) (pybop.pybamm.EISSimulator method) (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) _chain_files (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _chains_in_memory (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _check_compatible_transformation() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) _check_data_consistency() (dataset.Dataset method) _check_for_finite_cost() (pybop._result.Result method) (pybop.Result method) _check_frequency_constraints() (dataset.Dataset static method) _check_initial_phase() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _check_stopping_criteria() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _check_time_constraints() (dataset.Dataset static method) _collect_parameters() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) _compute_far_point() (in module pybop.plot.voronoi) _cost (pybop._result.Result attribute) (pybop.LogPosterior attribute) (pybop.Problem attribute) (pybop.problems.log_pdf.LogPosterior attribute) (pybop.problems.problem.Problem attribute) (pybop.Result attribute) _cov0 (pybop.BaseSampler attribute) (pybop.samplers.base_sampler.BaseSampler attribute) _create_interpolant() (pybop.Interpolant method) (pybop.models.lithium_ion.utils.Interpolant method) _current (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.AdamWImpl attribute) (pybop.optimisers.GradientDescentImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _current_df (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _current_f (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.AdamWImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _dataset (pybop.costs.base_cost.BaseCost attribute) _de (pybop.costs.base_cost.BaseCost attribute), [1] _determine_rebuild_requirement() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) _dict (pybop.simulators.solution.Solution attribute) (pybop.Solution attribute) _dim (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) (pybop.optimisers.RandomSearchImpl attribute) _discretisation_kwargs (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _distribution (pybop.Parameter attribute) (pybop.Parameters attribute) (pybop.parameters.parameter.Parameter attribute) (pybop.parameters.parameter.Parameters attribute) _distributions_list (pybop.JointDistribution attribute) (pybop.parameters.distributions.JointDistribution attribute) _dlogpdf_dx() (pybop.Distribution method) (pybop.Exponential method) (pybop.Gaussian method) (pybop.parameters.distributions.Distribution method) (pybop.parameters.distributions.Exponential method) (pybop.parameters.distributions.Gaussian method) (pybop.parameters.distributions.Uniform method) (pybop.Uniform method) _domain (pybop.costs.base_cost.BaseCost attribute) (pybop.costs.weighted_cost.WeightedCost attribute) (pybop.WeightedCost attribute) _domain_data (pybop.costs.base_cost.BaseCost attribute) (pybop.costs.feature_distances.FeatureDistance attribute) _end_initial_phase() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _eps (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _eta (pybop.optimisers._gradient_descent.GradientDescentImpl attribute), [1] (pybop.optimisers.GradientDescentImpl attribute), [1] _evaluate() (pybop._evaluation.PopulationEvaluator method) (pybop._evaluation.ScalarEvaluator method) (pybop._evaluation.SequentialEvaluator method) (pybop.PopulationEvaluator method) (pybop.ScalarEvaluator method) (pybop.SequentialEvaluator method) _evaluation_files (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _experiment (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _extract_log_pdf() (pybop.ChainProcessor method) (pybop.MultiChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) (pybop.samplers.chain_processor.MultiChainProcessor method) (pybop.samplers.chain_processor.SingleChainProcessor method) (pybop.SingleChainProcessor method) _f_best (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.AdamWImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) (pybop.optimisers.GradientDescentImpl attribute), [1] (pybop.optimisers.IRPropPlusImpl attribute) (pybop.optimisers.RandomSearchImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _f_current (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers.IRPropPlusImpl attribute) _f_eval (pybop.pybamm.eis_simulator.EISSimulator attribute) (pybop.pybamm.EISSimulator attribute) _feature_selection() (pybop.costs.feature_distances.ExponentialFeatureDistance method) (pybop.costs.feature_distances.FeatureDistance method) (pybop.costs.feature_distances.SquareRootFeatureDistance method) (pybop.ExponentialFeatureDistance method) (pybop.SquareRootFeatureDistance method) _finalise_logging() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _finite_boundaries (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) _fit() (pybop.costs.feature_distances.FeatureDistance method) _fit_guess() (pybop.costs.feature_distances.ExponentialFeatureDistance method) (pybop.costs.feature_distances.FeatureDistance method) (pybop.costs.feature_distances.SquareRootFeatureDistance method) (pybop.ExponentialFeatureDistance method) (pybop.SquareRootFeatureDistance method) _fitness (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) _geometry (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _get_covariance_and_mean() (pybop.MultivariateLogNormal method) (pybop.parameters.multivariate_distributions.MultivariateLogNormal method) _get_single_or_all() (pybop._result.Result method) (pybop.Result method) _gradient_previous (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers.IRPropPlusImpl attribute) _has_sensitivities (pybop.MetaProblem attribute) (pybop.Problem attribute) (pybop.problems.meta_problem.MetaProblem attribute) (pybop.problems.problem.Problem attribute) _initial_cost (pybop._result.Result attribute) (pybop.Result attribute) _initial_phase (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _initial_phase_iterations (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _initial_state (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _initial_value (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) _initialise_chain_processor() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _initialise_eis_matrices() (pybop.pybamm.eis_simulator.EISSimulator method) (pybop.pybamm.EISSimulator method) _initialise_logging() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _initialise_storage() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _initialise_variables() (pybop.FailedSolution method) (pybop.simulators.failed_solution.FailedSolution method) _input_parameter_names (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _interp_func (pybop.Interpolant attribute) (pybop.models.lithium_ion.utils.Interpolant attribute) _inverse_fit_function() (pybop.costs.feature_distances.ExponentialFeatureDistance method) (pybop.costs.feature_distances.FeatureDistance method) (pybop.costs.feature_distances.SquareRootFeatureDistance method) (pybop.ExponentialFeatureDistance method) (pybop.SquareRootFeatureDistance method)

_is_elementwise (transformations.ComposedTransformation attribute) _is_region_outside_bounds() (in module pybop.plot.voronoi) _iter_transformations() (transformations.ComposedTransformation method) _iteration_number (pybop._result.Result attribute) (pybop.Result attribute) _iterations (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _jac (pybop.pybamm.eis_simulator.EISSimulator attribute) (pybop.pybamm.EISSimulator attribute) _lam (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _log_filename (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _log_pdf (pybop.BaseSampler attribute) (pybop.samplers.base_sampler.BaseSampler attribute) _log_to_screen (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _logger (pybop.BaseOptimiser attribute) (pybop.BaseSampler attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.samplers.base_sampler.BaseSampler attribute) _logpi (pybop.costs.log_likelihoods.GaussianLogLikelihood attribute), [1] (pybop.GaussianLogLikelihood attribute), [1] _loop_iters (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _lower (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers.RandomSearchImpl attribute) _m (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _max_iterations (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _mean0 (pybop.BaseSampler attribute) (pybop.samplers.base_sampler.BaseSampler attribute) _message (pybop._result.Result attribute) (pybop.Result attribute) _minimising (pybop._logging.Logger attribute) (pybop._result.Result attribute) (pybop.Logger attribute) (pybop.Problem attribute) (pybop.problems.problem.Problem attribute) (pybop.Result attribute) _model (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _model_rebuild() (pybop.pybamm.eis_simulator.EISSimulator method) (pybop.pybamm.EISSimulator method) _multistart (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) _multivariate (pybop.Parameters attribute) (pybop.parameters.parameter.Parameters attribute) _n_evaluations (pybop._result.Result attribute) (pybop.Result attribute) _n_iterations (pybop._result.Result attribute) (pybop.Result attribute) _n_parameters (pybop.BaseSampler attribute) (pybop.Exponential attribute) (pybop.Gaussian attribute) (pybop.JointDistribution attribute) (pybop.MultivariateGaussian attribute) (pybop.MultivariateLogNormal attribute) (pybop.MultivariateNonparametric attribute) (pybop.MultivariateUniform attribute) (pybop.parameters.distributions.Exponential attribute) (pybop.parameters.distributions.Gaussian attribute) (pybop.parameters.distributions.JointDistribution attribute) (pybop.parameters.distributions.Uniform attribute) (pybop.parameters.multivariate_distributions.MultivariateGaussian attribute) (pybop.parameters.multivariate_distributions.MultivariateLogNormal attribute) (pybop.parameters.multivariate_distributions.MultivariateNonparametric attribute) (pybop.parameters.multivariate_distributions.MultivariateUniform attribute) (pybop.samplers.base_sampler.BaseSampler attribute) (pybop.Uniform attribute) (transformations.ComposedTransformation attribute) (transformations.IdentityTransformation attribute) (transformations.LogTransformation attribute) (transformations.ScaledTransformation attribute) _needs_sensitivities (pybop.BaseOptimiser attribute) (pybop.BasePintsSampler attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _options (pybop.BaseOptimiser attribute) (pybop.BaseSampler attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.samplers.base_sampler.BaseSampler attribute) _output_variables (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _pa (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) _pad_sigma() (pybop.costs.log_likelihoods.GaussianLogLikelihood method) (pybop.GaussianLogLikelihood method) _parameter_names (pybop.FailedSolution attribute) (pybop.simulators.failed_solution.FailedSolution attribute) _parameter_values (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _parameters (pybop.MetaProblem attribute) (pybop.Parameters attribute) (pybop.parameters.parameter.Parameters attribute) (pybop.Problem attribute) (pybop.problems.meta_problem.MetaProblem attribute) (pybop.problems.problem.Problem attribute) _pints_optimiser (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _position (pybop.MarginalDistribution attribute) (pybop.parameters.multivariate_distributions.MarginalDistribution attribute) _print_verbose_output() (pybop._logging.Logger method) (pybop.Logger method) _problem (pybop._result.Result attribute) (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.Result attribute) _process_chains() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _process_events() (pybop.pybamm.SymbolReplacer method) (pybop.pybamm.utils.SymbolReplacer method) _process_initial_conditions (pybop.pybamm.SymbolReplacer attribute) (pybop.pybamm.utils.SymbolReplacer attribute) _process_solutions() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) _process_symbol() (pybop.pybamm.SymbolReplacer method) (pybop.pybamm.utils.SymbolReplacer method) _processed_symbols (pybop.pybamm.SymbolReplacer attribute) (pybop.pybamm.utils.SymbolReplacer attribute) _proposed (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.AdamWImpl attribute) (pybop.optimisers.IRPropPlusImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _ready_for_tell (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.AdamWImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) (pybop.optimisers.GradientDescentImpl attribute), [1] (pybop.optimisers.IRPropPlusImpl attribute) (pybop.optimisers.RandomSearchImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _requires_model_rebuild (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _run() (pybop.BaseOptimiser method) (pybop.BasePintsOptimiser method) (pybop.EP_BOLFI method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) (pybop.optimisers.ep_bolfi_optimiser.EP_BOLFI method) (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution method) (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.SciPyDifferentialEvolution method) (pybop.SciPyMinimize method) _running (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.AdamWImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) (pybop.optimisers.GradientDescentImpl attribute), [1] (pybop.optimisers.IRPropPlusImpl attribute) (pybop.optimisers.RandomSearchImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _sampler (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _scipy_result (pybop._result.Result attribute) (pybop.Result attribute) _set_callback() (pybop.BaseSciPyOptimiser method) _set_protocol() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) _set_up_optimiser() (pybop.BaseOptimiser method) (pybop.BasePintsOptimiser method) (pybop.EP_BOLFI method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) (pybop.optimisers.ep_bolfi_optimiser.EP_BOLFI method) (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution method) (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.SciPyDifferentialEvolution method) (pybop.SciPyMinimize method) _set_up_solution_method() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) _simulate_with_rebuild() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) _simulate_without_rebuild() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) _simulation (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _simulator (pybop.Problem attribute) (pybop.problems.problem.Problem attribute) (pybop.pybamm.eis_simulator.EISSimulator attribute) (pybop.pybamm.EISSimulator attribute) _single_chain (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _solve (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _solve() (pybop.pybamm.eis_simulator.EISSimulator method) (pybop.pybamm.EISSimulator method) _solver (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _sort_region_vertices() (in module pybop.plot.voronoi) _spatial_methods (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _step_sizes (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers.IRPropPlusImpl attribute) _submesh_types (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _suggested_population_size() (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers.CuckooSearchImpl method) (pybop.optimisers.RandomSearchImpl method) _summary_variables (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins attribute) (pybop.models.lithium_ion.WeppnerHuggins attribute) _supported_features (pybop.costs.feature_distances.ExponentialFeatureDistance attribute) (pybop.costs.feature_distances.FeatureDistance attribute) (pybop.costs.feature_distances.SquareRootFeatureDistance attribute) (pybop.ExponentialFeatureDistance attribute) (pybop.SquareRootFeatureDistance attribute) _symbol_replacement_map (pybop.pybamm.SymbolReplacer attribute) (pybop.pybamm.utils.SymbolReplacer attribute) _t_eval (pybop.FailedSolution attribute) (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) (pybop.simulators.failed_solution.FailedSolution attribute) _t_interp (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _target (pybop.costs.base_cost.BaseCost attribute) _target_data (pybop.costs.base_cost.BaseCost attribute) (pybop.costs.feature_distances.FeatureDistance attribute) _temperature (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _temperature_decay (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _time (pybop._result.Result attribute) (pybop.Result attribute) _transform (pybop.Parameters attribute) (pybop.parameters.parameter.Parameters attribute) _transform() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) _transformation (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) _transformations (transformations.ComposedTransformation attribute) _update_previous (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers.IRPropPlusImpl attribute) _upper (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers.RandomSearchImpl attribute) _v (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) _validate() (pybop._result.Result method) (pybop.Result method) _validate_covariance_matrix() (pybop.BaseSampler method) (pybop.samplers.base_sampler.BaseSampler method) _validate_initial_value_within_bounds() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) _validate_inputs() (pybop.FailedSolution method) (pybop.simulators.failed_solution.FailedSolution method) _var_pts (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) _variable_names (pybop.FailedSolution attribute) (pybop.simulators.failed_solution.FailedSolution attribute) _variables (pybop.FailedSolution attribute) (pybop.simulators.failed_solution.FailedSolution attribute) _verbose (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _voronoi_regions() (in module pybop.plot.voronoi) _warm_up (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _x (pybop._result.Result attribute) (pybop.Result attribute) _x0 (pybop._result.Result attribute) (pybop.Result attribute) _x_best (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.AdamWImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) (pybop.optimisers.GradientDescentImpl attribute) (pybop.optimisers.IRPropPlusImpl attribute) (pybop.optimisers.RandomSearchImpl attribute) (pybop.optimisers.SimulatedAnnealingImpl attribute) _x_current (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers.IRPropPlusImpl attribute) _x_model (pybop._result.Result attribute) (pybop.Result attribute)

A

abandon_nests() (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers.CuckooSearchImpl method) absolute_tolerance (pybop.optimisers.base_pints_optimiser.PintsOptions attribute), [1] (pybop.PintsOptions attribute), [1] active (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) AdamW (class in pybop) (class in pybop.optimisers.pints_optimisers) AdamWImpl (class in pybop.optimisers) (class in pybop.optimisers._adamw) add() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) add_spaces() (in module pybop) (in module pybop._utils) add_traces() (pybop.plot.standard_plots.StandardPlot method) (pybop.plot.StandardPlot method) add_variable_to_model() (in module pybop.pybamm) (in module pybop.pybamm.design_variables) all_inputs (pybop.simulators.solution.Solution attribute) (pybop.Solution attribute) all_samples (pybop.samplers.base_sampler.SamplingResult attribute)

allow_stretching (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.OCPAverage attribute) append() (transformations.ComposedTransformation method) ArrayLike (in module pybop.parameters.parameter) ask() (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.optimisers.AdamWImpl method) (pybop.optimisers.CuckooSearchImpl method) (pybop.optimisers.GradientDescentImpl method) (pybop.optimisers.IRPropPlusImpl method) (pybop.optimisers.RandomSearchImpl method) (pybop.optimisers.SimulatedAnnealingImpl method) assign_nearest_value() (in module pybop.plot.voronoi) atol (pybop.SciPyDifferentialEvolutionOptions attribute) autocorrelation() (pybop.samplers.base_sampler.SamplingResult method) axis_titles (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute)

B

b (pybop.pybamm.eis_simulator.EISSimulator attribute) (pybop.pybamm.EISSimulator attribute) b1 (pybop.optimisers._adamw.AdamWImpl property) (pybop.optimisers.AdamWImpl property) b2 (pybop.optimisers._adamw.AdamWImpl property) (pybop.optimisers.AdamWImpl property) base_transformation module BaseApplication (class in pybop) (class in pybop.applications.base_method) BaseCost (class in pybop.costs.base_cost) BaseEvaluator (class in pybop._evaluation) BaseGroupedModel (class in pybop.models.lithium_ion.base_model) BaseMultivariateDistribution (class in pybop.parameters.multivariate_distributions) BaseOptimiser (class in pybop) (class in pybop.optimisers.base_optimiser) BasePintsOptimiser (class in pybop) (class in pybop.optimisers.base_pints_optimiser) BasePintsSampler (class in pybop) (class in pybop.samplers.base_pints_sampler) BaseSampler (class in pybop) (class in pybop.samplers.base_sampler) BaseSciPyOptimiser (class in pybop) BaseSimulator (class in pybop) (class in pybop.simulators.base_simulator)

BayesianOptimisationResult (class in pybop.optimisers.ep_bolfi_optimiser) best_cost (pybop._result.Result property) (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute) (pybop.Result property) best_inputs (pybop._result.Result property) (pybop.Result property) beta (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) bolfi_initial_sobol_samples (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) bolfi_optimally_acquired_samples (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) bolfi_posterior_effective_sample_size (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) boundaries (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers.AdamWImpl attribute) boundaries_in_standard_deviations (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) Bounds (class in pybop.parameters.parameter) bounds (pybop.Parameter property) (pybop.parameters.parameter.Parameter property) BoundsPair (in module pybop.parameters.parameter) build_model() (pybop.models.lithium_ion.base_model.BaseGroupedModel method) built_model (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator property)

C

calculate_impedance() (pybop.pybamm.eis_simulator.EISSimulator method) (pybop.pybamm.EISSimulator method) callback (pybop.SciPyDifferentialEvolutionOptions attribute) cdf() (pybop.Distribution method) (pybop.MultivariateLogNormal method) (pybop.parameters.distributions.Distribution method) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution method) (pybop.parameters.multivariate_distributions.MultivariateLogNormal method) cdf_marginal() (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution method) cell_mass() (in module pybop.pybamm) (in module pybop.pybamm.parameter_utils) cell_volume() (in module pybop.pybamm) (in module pybop.pybamm.parameter_utils) CellTemperature (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.cell_temperature) chain_files (pybop.PintsSamplerOptions attribute), [1] (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute), [1] ChainProcessor (class in pybop) (class in pybop.samplers.chain_processor) chains (pybop.samplers.base_sampler.SamplingResult attribute), [1] chains() (in module pybop.plot) (in module pybop.plot.samples) chains_in_memory (pybop.BasePintsSampler property) (pybop.PintsSamplerOptions attribute), [1] (pybop.samplers.base_pints_sampler.BasePintsSampler property) (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute), [1] check() (dataset.Dataset method) check_browser_availability() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) check_monotonicity() (pybop.applications.base_method.BaseApplication method) (pybop.BaseApplication method) check_renderer_settings() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) classification module classify_using_hessian() (in module classification) clip() (pybop.parameters.parameter.Bounds method) clip_array() (pybop.parameters.parameter.Bounds method) clip_candidates() (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers.RandomSearchImpl method) clip_nests() (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers.CuckooSearchImpl method) CMAES (class in pybop) (class in pybop.optimisers.pints_optimisers) coeff (transformations.UnitHyperCube attribute), [1] coefficient (transformations.ScaledTransformation attribute) columns (dataset.PyprobeResult property) combine() (pybop._result.Result static method) (pybop.Result static method) compatible_transformations (pybop.MultivariateGaussian property) (pybop.MultivariateLogNormal property) (pybop.MultivariateNonparametric property) (pybop.MultivariateUniform property) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution property) (pybop.parameters.multivariate_distributions.MultivariateGaussian property) (pybop.parameters.multivariate_distributions.MultivariateLogNormal property) (pybop.parameters.multivariate_distributions.MultivariateNonparametric property) (pybop.parameters.multivariate_distributions.MultivariateUniform property) ComposedTransformation (class in transformations) constraints (pybop.SciPyMinimizeOptions attribute), [1] construct_transformation() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) contains() (pybop.parameters.parameter.Bounds method) contains_array() (pybop.parameters.parameter.Bounds method) contour() (in module pybop.plot) (in module pybop.plot.contour)

control_functions (dataset.Dataset attribute) convergence() (in module pybop.plot) (in module pybop.plot.convergence) convert_covariance_matrix() (base_transformation.Transformation method) convert_grad_to_array() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) convert_standard_deviation() (base_transformation.Transformation method) convert_to_pybamm_initial_state() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) cooling_rate (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl property) (pybop.optimisers.SimulatedAnnealingImpl property) copy() (pybop.BaseSimulator method) (pybop.FailedSolution method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.pybamm.eis_simulator.EISSimulator method) (pybop.pybamm.EISSimulator method) (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) (pybop.simulators.base_simulator.BaseSimulator method) (pybop.simulators.failed_solution.FailedSolution method) cost (pybop._result.Result property) (pybop.applications.gitt_methods.GITTFit attribute) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.GITTFit attribute) (pybop.GITTPulseFit attribute) (pybop.InverseOCV attribute) (pybop.models.lithium_ion.utils.InverseOCV attribute) (pybop.OCPAverage attribute) (pybop.OCPCapacityToStoichiometry attribute) (pybop.Problem property) (pybop.problems.problem.Problem property) (pybop.Result property) cost_convergence (pybop._logging.Logger property) (pybop.Logger property) cost_wrapper() (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.SciPyMinimize method) costs (pybop.costs.weighted_cost.WeightedCost attribute) (pybop.WeightedCost attribute) cov0 (pybop.BaseSampler property) (pybop.samplers.base_sampler.BaseSampler property) covariance_scaled_mean (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) covariance_scaled_means_per_feature (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) create_grouped_parameters() (pybop.models.lithium_ion.cell_temperature.CellTemperature static method) (pybop.models.lithium_ion.CellTemperature static method) (pybop.models.lithium_ion.grouped_spm.GroupedSPM static method) (pybop.models.lithium_ion.grouped_spme.GroupedSPMe static method) (pybop.models.lithium_ion.GroupedSPM static method) (pybop.models.lithium_ion.GroupedSPMe static method) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion static method) (pybop.models.lithium_ion.SPDiffusion static method) (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins static method) (pybop.models.lithium_ion.WeppnerHuggins static method) create_simulation() (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) create_trace() (pybop.plot.standard_plots.StandardPlot method) (pybop.plot.StandardPlot method) CuckooSearch (class in pybop) (class in pybop.optimisers.pints_optimisers) CuckooSearchImpl (class in pybop.optimisers) (class in pybop.optimisers._cuckoo) cycles (pybop.FailedSolution attribute) (pybop.simulators.failed_solution.FailedSolution attribute)

D

data (dataset.Dataset attribute) (pybop.FailedVariable attribute) (pybop.simulators.failed_solution.FailedVariable attribute) (pybop.simulators.solution.SolutionVariable attribute) data_dict() (pybop._result.Result method) (pybop.Result method) dataset module Dataset (class in dataset) dataset (pybop.costs.error_measures.ErrorMeasure attribute) (pybop.ErrorMeasure attribute) dataset() (in module pybop.plot) (in module pybop.plot.dataset) debug_mode (pybop.pybamm.eis_simulator.EISSimulator property) (pybop.pybamm.EISSimulator property) (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) default() (pybop._utils.NumpyEncoder method) default_geometry (pybop.models.lithium_ion.cell_temperature.CellTemperature property) (pybop.models.lithium_ion.CellTemperature property) (pybop.models.lithium_ion.grouped_spm.GroupedSPM property) (pybop.models.lithium_ion.grouped_spme.GroupedSPMe property) (pybop.models.lithium_ion.GroupedSPM property) (pybop.models.lithium_ion.GroupedSPMe property) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion property) (pybop.models.lithium_ion.SPDiffusion property) (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins property) (pybop.models.lithium_ion.WeppnerHuggins property) DEFAULT_LAYOUT_OPTIONS (in module pybop.plot.standard_plots) default_max_iterations (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.optimisers.base_pints_optimiser.PintsOptions attribute), [1] (pybop.PintsOptions attribute), [1] default_options() (pybop.BaseOptimiser static method) (pybop.BasePintsOptimiser static method) (pybop.BasePintsSampler static method) (pybop.BaseSampler static method) (pybop.optimisers.base_optimiser.BaseOptimiser static method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser static method) (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution static method) (pybop.optimisers.scipy_optimisers.SciPyMinimize static method) (pybop.samplers.base_pints_sampler.BasePintsSampler static method) (pybop.samplers.base_sampler.BaseSampler static method) (pybop.SciPyDifferentialEvolution static method) (pybop.SciPyMinimize static method) default_parameter_values (pybop.ExponentialDecayModel property) (pybop.models._exponential_decay.ExponentialDecayModel property) (pybop.models.lithium_ion.cell_temperature.CellTemperature property) (pybop.models.lithium_ion.CellTemperature property) (pybop.models.lithium_ion.grouped_spm.GroupedSPM property) (pybop.models.lithium_ion.grouped_spme.GroupedSPMe property) (pybop.models.lithium_ion.GroupedSPM property) (pybop.models.lithium_ion.GroupedSPMe property) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion property) (pybop.models.lithium_ion.SPDiffusion property) (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins property) (pybop.models.lithium_ion.WeppnerHuggins property) default_quick_plot_variables (pybop.ExponentialDecayModel property) (pybop.models._exponential_decay.ExponentialDecayModel property) (pybop.models.lithium_ion.cell_temperature.CellTemperature property) (pybop.models.lithium_ion.CellTemperature property) (pybop.models.lithium_ion.grouped_spm.GroupedSPM property) (pybop.models.lithium_ion.grouped_spme.GroupedSPMe property) (pybop.models.lithium_ion.GroupedSPM property) (pybop.models.lithium_ion.GroupedSPMe property) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion property) (pybop.models.lithium_ion.SPDiffusion property) (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins property) (pybop.models.lithium_ion.WeppnerHuggins property)

default_solver (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins property) (pybop.models.lithium_ion.WeppnerHuggins property) default_spatial_methods (pybop.models.lithium_ion.cell_temperature.CellTemperature property) (pybop.models.lithium_ion.CellTemperature property) (pybop.models.lithium_ion.grouped_spm.GroupedSPM property) (pybop.models.lithium_ion.grouped_spme.GroupedSPMe property) (pybop.models.lithium_ion.GroupedSPM property) (pybop.models.lithium_ion.GroupedSPMe property) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion property) (pybop.models.lithium_ion.SPDiffusion property) (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins property) (pybop.models.lithium_ion.WeppnerHuggins property) default_submesh_types (pybop.models.lithium_ion.cell_temperature.CellTemperature property) (pybop.models.lithium_ion.CellTemperature property) (pybop.models.lithium_ion.grouped_spm.GroupedSPM property) (pybop.models.lithium_ion.grouped_spme.GroupedSPMe property) (pybop.models.lithium_ion.GroupedSPM property) (pybop.models.lithium_ion.GroupedSPMe property) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion property) (pybop.models.lithium_ion.SPDiffusion property) (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins property) (pybop.models.lithium_ion.WeppnerHuggins property) DEFAULT_SUBPLOT_OPTIONS (in module pybop.plot.standard_plots) DEFAULT_SUBPLOT_TRACE_OPTIONS (in module pybop.plot.standard_plots) DEFAULT_TRACE_OPTIONS (in module pybop.plot.standard_plots) default_var_pts (pybop.models.lithium_ion.cell_temperature.CellTemperature property) (pybop.models.lithium_ion.CellTemperature property) (pybop.models.lithium_ion.grouped_spm.GroupedSPM property) (pybop.models.lithium_ion.grouped_spme.GroupedSPMe property) (pybop.models.lithium_ion.GroupedSPM property) (pybop.models.lithium_ion.GroupedSPMe property) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion property) (pybop.models.lithium_ion.SPDiffusion property) (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins property) (pybop.models.lithium_ion.WeppnerHuggins property) DesignCost (class in pybop) (class in pybop.costs.design_cost) differential_capacity_interpolant (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.OCPAverage attribute) DifferentialEvolutionMCMC (class in pybop) (class in pybop.samplers.pints_samplers) disp (pybop.SciPyDifferentialEvolutionOptions attribute) (pybop.SciPyMinimizeOptions attribute), [1] Distribution (class in pybop) (class in pybop.parameters.distributions) distribution (pybop.Distribution attribute), [1] (pybop.Parameter property) (pybop.Parameters property) (pybop.parameters.distributions.Distribution attribute), [1] (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution attribute) (pybop.parameters.parameter.Parameter property) (pybop.parameters.parameter.Parameters property) distribution_log_x (pybop.MultivariateLogNormal attribute) (pybop.parameters.multivariate_distributions.MultivariateLogNormal attribute) domain (dataset.Dataset attribute) (pybop.costs.base_cost.BaseCost property) (pybop.costs.error_measures.ErrorMeasure attribute) (pybop.ErrorMeasure attribute) (pybop.Problem property) (pybop.problems.problem.Problem property) domain_data (pybop.costs.base_cost.BaseCost property) (pybop.costs.error_measures.ErrorMeasure attribute) (pybop.ErrorMeasure attribute) (pybop.Problem property) (pybop.problems.problem.Problem property) downsample_constant_current() (in module interpolate_current) DramACMC (class in pybop) (class in pybop.samplers.pints_samplers) DREAM (class in pybop) (class in pybop.samplers.pints_samplers)

E

effective_sample_size() (pybop.samplers.base_sampler.SamplingResult method) EISSimulator (class in pybop.pybamm) (class in pybop.pybamm.eis_simulator) electrode_area() (in module pybop.pybamm.parameter_utils) EmceeHammerMCMC (class in pybop) (class in pybop.samplers.pints_samplers) end_index (pybop.costs.feature_distances.FeatureDistance attribute) ensure_plotly_installed() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) EP_BOLFI (class in pybop) (class in pybop.optimisers.ep_bolfi_optimiser) ep_bolfi_problem_processing() (in module pybop.optimisers.ep_bolfi_optimiser) ep_iterations (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) ep_randomise_feature_order (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) ep_stepwise_dampener (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) ep_total_dampening (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) EPBOLFIOptions (class in pybop) (class in pybop.optimisers.ep_bolfi_optimiser) ErrorMeasure (class in pybop) (class in pybop.costs.error_measures) eta_max (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute), [1] (pybop.optimisers.IRPropPlusImpl attribute), [1] eta_min (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute), [1] (pybop.optimisers.IRPropPlusImpl attribute), [1] evaluate() (pybop.costs.base_cost.BaseCost method) (pybop.costs.base_cost.LogPrior method) (pybop.costs.design_cost.DesignCost method) (pybop.costs.error_measures.ErrorMeasure method) (pybop.costs.weighted_cost.WeightedCost method) (pybop.DesignCost method) (pybop.ErrorMeasure method) (pybop.LogPrior method) (pybop.Problem method) (pybop.problems.problem.Problem method) (pybop.WeightedCost method)

evaluate_batch() (pybop.MetaProblem method) (pybop.Problem method) (pybop.problems.meta_problem.MetaProblem method) (pybop.problems.problem.Problem method) Evaluation (class in pybop.costs.evaluation) evaluation_files (pybop.PintsSamplerOptions attribute), [1] (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute), [1] evaluator (pybop.BasePintsOptimiser property) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser property) experiment (pybop.pybamm.Simulator attribute) (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator attribute) (pybop.pybamm.simulator.Simulator property) Exponential (class in pybop) (class in pybop.parameters.distributions) ExponentialDecayModel (class in pybop) (class in pybop.models._exponential_decay) ExponentialFeatureDistance (class in pybop) (class in pybop.costs.feature_distances) extend_log() (pybop._logging.Logger method) (pybop.Logger method)

F

f_best() (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.optimisers.AdamWImpl method) (pybop.optimisers.CuckooSearchImpl method) (pybop.optimisers.GradientDescentImpl method) (pybop.optimisers.IRPropPlusImpl method) (pybop.optimisers.RandomSearchImpl method) (pybop.optimisers.SimulatedAnnealingImpl method)

f_guessed() (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers.AdamWImpl method) f_guessed_tracking() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) FailedSolution (class in pybop) (class in pybop.simulators.failed_solution) FailedVariable (class in pybop) (class in pybop.simulators.failed_solution) failure() (pybop.costs.base_cost.BaseCost method) feature (pybop.costs.feature_distances.FeatureDistance attribute) FeatureDistance (class in pybop.costs.feature_distances) FLOAT_FORMAT (in module pybop)

G

Gaussian (class in pybop) (class in pybop.parameters.distributions) GaussianLogLikelihood (class in pybop) (class in pybop.costs.log_likelihoods) GaussianLogLikelihoodKnownSigma (class in pybop) (class in pybop.costs.log_likelihoods) generate_consistent_current() (in module interpolate_current) get() (dataset.PyprobeResult method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) get_bounds() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) get_bounds_array() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) get_bounds_for_plotly() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) get_covariance() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) get_evaluation_metrics() (pybop.ChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) get_finite_initial_cost() (pybop.Problem method) (pybop.problems.problem.Problem method) get_initial_value() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) get_initial_values() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) get_interpolant() (dataset.Dataset method) get_mean() (pybop.Parameter method) (pybop.Parameters method) (pybop.parameters.parameter.Parameter method) (pybop.parameters.parameter.Parameters method)

get_model_inputs() (pybop.Problem method) (pybop.problems.problem.Problem method) get_parameters_from_dict() (pybop.BaseSimulator method) (pybop.simulators.base_simulator.BaseSimulator method) get_problem_inputs() (pybop.MetaProblem method) (pybop.problems.meta_problem.MetaProblem method) get_std() (pybop.Parameter method) (pybop.Parameters method) (pybop.parameters.parameter.Parameter method) (pybop.parameters.parameter.Parameters method) get_subset() (dataset.Dataset method) get_summary_statistics() (pybop.samplers.base_sampler.SamplingResult method) get_values() (pybop.costs.evaluation.Evaluation method) gitt_dataset (pybop.applications.gitt_methods.GITTFit attribute) (pybop.GITTFit attribute) GITTFit (class in pybop) (class in pybop.applications.gitt_methods) GITTPulseFit (class in pybop) (class in pybop.applications.gitt_methods) go (pybop.plot.plotly_manager.PlotlyManager attribute), [1] (pybop.plot.PlotlyManager attribute), [1] (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) GradientDescent (class in pybop) (class in pybop.optimisers.pints_optimisers) GradientDescentImpl (class in pybop.optimisers) (class in pybop.optimisers._gradient_descent) GroupedSPM (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.grouped_spm) GroupedSPMe (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.grouped_spme)

H

HaarioACMC (class in pybop) (class in pybop.samplers.pints_samplers) HaarioBardenetACMC (class in pybop) (class in pybop.samplers.pints_samplers) HamiltonianMCMC (class in pybop) (class in pybop.samplers.pints_samplers) has_sensitivities (pybop.BaseSimulator property) (pybop.MetaProblem property) (pybop.Problem property) (pybop.problems.meta_problem.MetaProblem property) (pybop.problems.problem.Problem property) (pybop.pybamm.eis_simulator.EISSimulator property) (pybop.pybamm.EISSimulator property) (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator property) (pybop.simulators.base_simulator.BaseSimulator property)

I

icdf (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution attribute) icdf() (pybop.Distribution method) (pybop.parameters.distributions.Distribution method) icdf_marginal() (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution method) IdentityTransformation (class in transformations) import_pybamm_solution() (in module dataset) import_pyprobe_result() (in module dataset) indices_of() (in module pybop.costs.feature_distances) init (pybop.SciPyDifferentialEvolutionOptions attribute) initial_conditions (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) initial_cost (pybop._result.Result property) (pybop.Result property) initial_phase_iterations (pybop.PintsSamplerOptions attribute) (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute) initial_state (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator property) initial_value (pybop.Parameter property) (pybop.parameters.parameter.Parameter property) input_parameter_names (pybop.pybamm.eis_simulator.EISSimulator property) (pybop.pybamm.EISSimulator property) (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator property) Inputs (in module pybop.parameters.parameter) insert_result() (pybop.costs.evaluation.Evaluation method) install_plotly() (pybop.plot.plotly_manager.PlotlyManager static method) (pybop.plot.PlotlyManager static method) integration_time (pybop.FailedSolution attribute) (pybop.simulators.failed_solution.FailedSolution attribute) inter (transformations.UnitHyperCube attribute), [1] intercept (transformations.ScaledTransformation attribute) Interpolant (class in pybop) (class in pybop.models.lithium_ion.utils) interpolate_current module

interpolate_point() (in module pybop.plot.voronoi) inverse_coeff (transformations.ScaledTransformation attribute) inverse_ocp (pybop.applications.gitt_methods.GITTFit attribute) (pybop.GITTFit attribute) InverseOCV (class in pybop) (class in pybop.models.lithium_ion.utils) IRPropMin (class in pybop) (class in pybop.optimisers.pints_optimisers) IRPropPlus (class in pybop) (class in pybop.optimisers.pints_optimisers) IRPropPlusImpl (class in pybop.optimisers) (class in pybop.optimisers._irprop_plus) is_elementwise() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) is_numeric() (in module pybop) (in module pybop._utils) items() (pybop.FailedSolution method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.simulators.failed_solution.FailedSolution method) iter_time (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) iteration (pybop._logging.Logger attribute) (pybop.BasePintsOptimiser property) (pybop.BasePintsSampler property) (pybop.Logger attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) iteration_number (pybop._result.Result property) (pybop.Result property)

J

jac (pybop.SciPyMinimizeOptions attribute), [1] jacobian() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) jacobian_S1() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method)

join() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) JointDistribution (class in pybop) (class in pybop.parameters.distributions)

K

keys() (pybop.FailedSolution method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.simulators.failed_solution.FailedSolution method)

L

lam (pybop.optimisers._adamw.AdamWImpl property) (pybop.optimisers.AdamWImpl property) layout (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) learning_rate() (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers.GradientDescentImpl method) levy_flight() (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers.CuckooSearchImpl method) load() (pybop._result.Result static method) (pybop.Result static method) load_data() (pybop._result.Result static method) (pybop.Result static method) load_data_dict() (in module pybop) (in module pybop._utils) loc (pybop.Exponential attribute) (pybop.Gaussian attribute) (pybop.parameters.distributions.Exponential attribute) (pybop.parameters.distributions.Gaussian attribute) log_evidence_mean (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute), [1] log_evidence_variance (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute), [1] log_filename (pybop.PintsSamplerOptions attribute), [1] (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute), [1] log_jacobian_det() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) log_jacobian_det_S1() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) log_likelihood (pybop.LogPosterior attribute) (pybop.problems.log_pdf.LogPosterior attribute) log_pdf (pybop.BaseSampler property) (pybop.samplers.base_sampler.BaseSampler property) log_prior (pybop.LogPosterior attribute) (pybop.problems.log_pdf.LogPosterior attribute)

log_to_screen (pybop.PintsSamplerOptions attribute), [1] (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute), [1] Logger (class in pybop) (class in pybop._logging) logger (pybop._result.Result attribute) (pybop.BaseOptimiser property) (pybop.BaseSampler property) (pybop.optimisers.base_optimiser.BaseOptimiser property) (pybop.Result attribute) (pybop.samplers.base_sampler.BaseSampler property) LogLikelihood (class in pybop) (class in pybop.costs.log_likelihoods) LogPDF (class in pybop) (class in pybop.problems.log_pdf) logpdf() (pybop.Distribution method) (pybop.JointDistribution method) (pybop.MultivariateLogNormal method) (pybop.MultivariateNonparametric method) (pybop.parameters.distributions.Distribution method) (pybop.parameters.distributions.JointDistribution method) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution method) (pybop.parameters.multivariate_distributions.MultivariateLogNormal method) (pybop.parameters.multivariate_distributions.MultivariateNonparametric method) logpdfS1() (pybop.Distribution method) (pybop.JointDistribution method) (pybop.parameters.distributions.Distribution method) (pybop.parameters.distributions.JointDistribution method) LogPosterior (class in pybop) (class in pybop.problems.log_pdf) LogPrior (class in pybop) (class in pybop.costs.base_cost) LogTransformation (class in transformations) lower (pybop.parameters.distributions.Uniform attribute) (pybop.parameters.parameter.Bounds attribute), [1] (pybop.Uniform attribute) (transformations.UnitHyperCube attribute), [1] lower_bounds (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute), [1]

M

M (pybop.pybamm.eis_simulator.EISSimulator attribute) (pybop.pybamm.EISSimulator attribute) make_subplots (pybop.plot.plotly_manager.PlotlyManager attribute), [1] (pybop.plot.PlotlyManager attribute), [1] (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) MALAMCMC (class in pybop) (class in pybop.samplers.pints_samplers) marginal() (pybop.MultivariateGaussian method) (pybop.MultivariateLogNormal method) (pybop.MultivariateNonparametric method) (pybop.MultivariateUniform method) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution method) (pybop.parameters.multivariate_distributions.MultivariateGaussian method) (pybop.parameters.multivariate_distributions.MultivariateLogNormal method) (pybop.parameters.multivariate_distributions.MultivariateNonparametric method) (pybop.parameters.multivariate_distributions.MultivariateUniform method) MarginalDistribution (class in pybop) (class in pybop.parameters.multivariate_distributions) max_evaluations (pybop.optimisers.base_pints_optimiser.PintsOptions attribute), [1] (pybop.PintsOptions attribute), [1] max_iterations (pybop.BasePintsOptimiser property) (pybop.BasePintsSampler property) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser property) (pybop.optimisers.base_pints_optimiser.PintsOptions attribute), [1] (pybop.PintsOptions attribute), [1] (pybop.PintsSamplerOptions attribute), [1] (pybop.samplers.base_pints_sampler.BasePintsSampler property) (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute), [1] max_posterior_sampling_retries (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) max_unchanged_iterations (pybop.optimisers.base_pints_optimiser.PintsOptions attribute), [1] (pybop.PintsOptions attribute), [1] maximum_a_posteriori (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute), [1] maxiter (pybop.SciPyDifferentialEvolutionOptions attribute) (pybop.SciPyMinimizeOptions attribute), [1] mean (pybop.MultivariateGaussian property) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution property) (pybop.parameters.multivariate_distributions.MultivariateGaussian property) mean() (pybop.Distribution method) (pybop.MarginalDistribution method) (pybop.parameters.distributions.Distribution method) (pybop.parameters.distributions.Uniform method) (pybop.parameters.multivariate_distributions.MarginalDistribution method) (pybop.Uniform method) mean0 (pybop.BaseSampler property) (pybop.samplers.base_sampler.BaseSampler property) MeanAbsoluteError (class in pybop) (class in pybop.costs.error_measures) MeanSquaredError (class in pybop) (class in pybop.costs.error_measures) message (pybop._result.Result attribute) (pybop._result.Result property) (pybop.optimisers.base_optimiser.OptimisationResult attribute) (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute) (pybop.Result attribute) (pybop.Result property) (pybop.samplers.base_sampler.SamplingResult attribute) MetaProblem (class in pybop) (class in pybop.problems.meta_problem) method (pybop.SciPyMinimizeOptions attribute), [1] method_name (pybop._result.Result attribute), [1] (pybop.optimisers.base_optimiser.OptimisationResult attribute) (pybop.Result attribute), [1] (pybop.samplers.base_sampler.SamplingResult attribute) MetropolisRandomWalkMCMC (class in pybop) (class in pybop.samplers.pints_samplers) min_iterations (pybop.optimisers.base_pints_optimiser.PintsOptions attribute), [1] (pybop.PintsOptions attribute), [1] minimising (pybop._result.Result property) (pybop.costs.base_cost.BaseCost attribute), [1] (pybop.costs.base_cost.LogPrior attribute) (pybop.costs.design_cost.DesignCost attribute) (pybop.costs.log_likelihoods.LogLikelihood attribute) (pybop.DesignCost attribute) (pybop.LogLikelihood attribute) (pybop.LogPrior attribute) (pybop.Problem attribute) (pybop.Problem property) (pybop.problems.problem.Problem attribute) (pybop.problems.problem.Problem property) (pybop.Result property) Minkowski (class in pybop) (class in pybop.costs.error_measures) model (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.GITTPulseFit attribute) (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator property) model_parameter_boundaries (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) module base_transformation classification dataset interpolate_current pybop pybop._evaluation pybop._logging pybop._result pybop._utils pybop._version pybop.applications pybop.applications.base_method pybop.applications.gitt_methods pybop.applications.ocp_methods pybop.costs pybop.costs.base_cost pybop.costs.design_cost pybop.costs.error_measures pybop.costs.evaluation pybop.costs.feature_distances pybop.costs.log_likelihoods pybop.costs.weighted_cost pybop.models pybop.models._exponential_decay pybop.models.lithium_ion pybop.models.lithium_ion.base_model pybop.models.lithium_ion.cell_temperature pybop.models.lithium_ion.grouped_spm pybop.models.lithium_ion.grouped_spme pybop.models.lithium_ion.sp_diffusion pybop.models.lithium_ion.utils pybop.models.lithium_ion.weppner_huggins pybop.optimisers pybop.optimisers._adamw pybop.optimisers._cuckoo pybop.optimisers._gradient_descent pybop.optimisers._irprop_plus pybop.optimisers._random_search pybop.optimisers._simulated_annealing pybop.optimisers.base_optimiser pybop.optimisers.base_pints_optimiser pybop.optimisers.ep_bolfi_optimiser pybop.optimisers.pints_optimisers pybop.optimisers.scipy_optimisers pybop.parameters pybop.parameters.distributions pybop.parameters.multivariate_distributions pybop.parameters.parameter pybop.plot pybop.plot.contour pybop.plot.convergence pybop.plot.dataset pybop.plot.nyquist pybop.plot.parameters pybop.plot.plotly_manager pybop.plot.problem pybop.plot.samples pybop.plot.standard_plots pybop.plot.voronoi pybop.problems pybop.problems.log_pdf pybop.problems.meta_problem pybop.problems.problem pybop.pybamm pybop.pybamm.design_variables pybop.pybamm.eis_simulator pybop.pybamm.parameter_utils pybop.pybamm.simulator pybop.pybamm.utils pybop.samplers pybop.samplers.base_pints_sampler pybop.samplers.base_sampler pybop.samplers.chain_processor pybop.samplers.pints_samplers pybop.simulators pybop.simulators.base_simulator pybop.simulators.failed_solution pybop.simulators.solution sensitivity_analysis transformations

MonomialGammaHamiltonianMCMC (class in pybop) (class in pybop.samplers.pints_samplers) MultiChainProcessor (class in pybop) (class in pybop.samplers.chain_processor) multistart (pybop.OptimiserOptions attribute), [1] (pybop.optimisers.base_optimiser.OptimiserOptions attribute), [1] MultivariateGaussian (class in pybop) (class in pybop.parameters.multivariate_distributions) MultivariateLogNormal (class in pybop) (class in pybop.parameters.multivariate_distributions) MultivariateNonparametric (class in pybop) (class in pybop.parameters.multivariate_distributions) MultivariateUniform (class in pybop) (class in pybop.parameters.multivariate_distributions) mutation (pybop.SciPyDifferentialEvolutionOptions attribute)

N

n_chains (pybop.PintsSamplerOptions attribute) (pybop.SamplerOptions attribute), [1] (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute) (pybop.samplers.base_sampler.SamplerOptions attribute), [1] n_data (pybop.costs.error_measures.ErrorMeasure attribute) (pybop.ErrorMeasure attribute) n_evaluations (pybop._result.Result property) (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute) (pybop.Result property) n_hyper_parameters() (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.optimisers.AdamWImpl method) (pybop.optimisers.GradientDescentImpl method) (pybop.optimisers.SimulatedAnnealingImpl method) n_iterations (pybop._result.Result property) (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute) (pybop.Result property) n_outputs (pybop.Problem attribute) (pybop.problems.problem.Problem attribute) n_parameters (base_transformation.Transformation property) (pybop.costs.base_cost.BaseCost property) (pybop.Problem property) (pybop.problems.problem.Problem property) (pybop.samplers.base_sampler.SamplingResult attribute) n_runs (pybop._result.Result attribute) (pybop.Result attribute) n_samples (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) n_states (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) n_sto_points (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPMerge attribute) (pybop.OCPAverage attribute) (pybop.OCPMerge attribute) name (pybop.BasePintsOptimiser property) (pybop.costs.base_cost.BaseCost property) (pybop.Exponential attribute) (pybop.FailedVariable attribute) (pybop.Gaussian attribute) (pybop.Interpolant attribute) (pybop.models.lithium_ion.utils.Interpolant attribute) (pybop.MultivariateGaussian attribute) (pybop.MultivariateLogNormal attribute) (pybop.MultivariateNonparametric attribute) (pybop.MultivariateUniform attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser property) (pybop.optimisers.pints_optimisers.SNES property) (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution property) (pybop.optimisers.scipy_optimisers.SciPyMinimize property) (pybop.parameters.distributions.Exponential attribute) (pybop.parameters.distributions.Gaussian attribute) (pybop.parameters.distributions.Uniform attribute) (pybop.parameters.multivariate_distributions.MultivariateGaussian attribute) (pybop.parameters.multivariate_distributions.MultivariateLogNormal attribute) (pybop.parameters.multivariate_distributions.MultivariateNonparametric attribute) (pybop.parameters.multivariate_distributions.MultivariateUniform attribute) (pybop.SciPyDifferentialEvolution property) (pybop.SciPyMinimize property) (pybop.simulators.failed_solution.FailedVariable attribute) (pybop.SNES property) (pybop.Uniform attribute)

name() (pybop.BaseOptimiser method) (pybop.EP_BOLFI method) (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.optimisers.AdamWImpl method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.optimisers.CuckooSearchImpl method) (pybop.optimisers.ep_bolfi_optimiser.EP_BOLFI method) (pybop.optimisers.GradientDescentImpl method) (pybop.optimisers.IRPropPlusImpl method) (pybop.optimisers.RandomSearchImpl method) (pybop.optimisers.SimulatedAnnealingImpl method) names (pybop.Parameters property) (pybop.parameters.parameter.Parameters property) needs_sensitivities (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) needs_sensitivities() (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.optimisers.AdamWImpl method) (pybop.optimisers.GradientDescentImpl method) (pybop.optimisers.IRPropPlusImpl method) (pybop.optimisers.SimulatedAnnealingImpl method) NelderMead (class in pybop) (class in pybop.optimisers.pints_optimisers) num_cols (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) num_rows (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) num_traces (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) NumericValue (in module pybop.parameters.parameter) NumpyEncoder (class in pybop._utils) NUTS (class in pybop) (class in pybop.samplers.pints_samplers) nyquist() (in module pybop.plot) (in module pybop.plot.nyquist)

O

ocp_charge (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPMerge attribute) (pybop.OCPAverage attribute) (pybop.OCPMerge attribute) ocp_discharge (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPMerge attribute) (pybop.OCPAverage attribute) (pybop.OCPMerge attribute) OCPAverage (class in pybop) (class in pybop.applications.ocp_methods) OCPCapacityToStoichiometry (class in pybop) (class in pybop.applications.ocp_methods) OCPMerge (class in pybop) (class in pybop.applications.ocp_methods) ocv_dataset (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.OCPCapacityToStoichiometry attribute) ocv_function (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.OCPCapacityToStoichiometry attribute) ocv_root (pybop.InverseOCV attribute) (pybop.models.lithium_ion.utils.InverseOCV attribute) optim (pybop.optimisers.base_optimiser.OptimisationResult attribute) OptimisationResult (class in pybop.optimisers.base_optimiser) optimiser (pybop.applications.gitt_methods.GITTFit attribute) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.BasePintsOptimiser property) (pybop.GITTFit attribute) (pybop.GITTPulseFit attribute) (pybop.InverseOCV attribute) (pybop.models.lithium_ion.utils.InverseOCV attribute) (pybop.OCPAverage attribute) (pybop.OCPCapacityToStoichiometry attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser property)

optimiser_options (pybop.applications.gitt_methods.GITTFit attribute) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.GITTFit attribute) (pybop.GITTPulseFit attribute) (pybop.InverseOCV attribute) (pybop.models.lithium_ion.utils.InverseOCV attribute) (pybop.OCPAverage attribute) (pybop.OCPCapacityToStoichiometry attribute) OptimiserOptions (class in pybop) (class in pybop.optimisers.base_optimiser) options (pybop.BaseOptimiser property) (pybop.BaseSampler property) (pybop.optimisers.base_optimiser.BaseOptimiser property) (pybop.samplers.base_sampler.BaseSampler property) output_variables (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator property)

P

p (pybop.costs.error_measures.Minkowski attribute) (pybop.costs.error_measures.SumOfPower attribute) (pybop.Minkowski attribute) (pybop.SumOfPower attribute) pa (pybop.optimisers._cuckoo.CuckooSearchImpl property) (pybop.optimisers.CuckooSearchImpl property) parallel (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) Parameter (class in pybop) (class in pybop.parameters.parameter) parameter_names (pybop.FailedSolution property) (pybop.simulators.failed_solution.FailedSolution property) parameter_values (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.GITTPulseFit attribute) (pybop.pybamm.eis_simulator.EISSimulator property) (pybop.pybamm.EISSimulator property) (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator property) ParameterError ParameterNotFoundError Parameters (class in pybop) (class in pybop.parameters.parameter) parameters (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.BaseSimulator attribute) (pybop.costs.base_cost.BaseCost attribute) (pybop.costs.base_cost.LogPrior attribute) (pybop.costs.log_likelihoods.LogLikelihood attribute) (pybop.GITTPulseFit attribute) (pybop.LogLikelihood attribute) (pybop.LogPrior attribute) (pybop.Problem property) (pybop.problems.problem.Problem property) (pybop.simulators.base_simulator.BaseSimulator attribute) parameters() (in module pybop.plot) (in module pybop.plot.parameters) ParameterValidationError parent_distribution (pybop.MarginalDistribution attribute) (pybop.parameters.multivariate_distributions.MarginalDistribution attribute) parse_data() (pybop.plot.standard_plots.StandardPlot method) (pybop.plot.StandardPlot method) pdf() (pybop.Distribution method) (pybop.MultivariateLogNormal method) (pybop.MultivariateNonparametric method) (pybop.parameters.distributions.Distribution method) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution method) (pybop.parameters.multivariate_distributions.MultivariateLogNormal method) (pybop.parameters.multivariate_distributions.MultivariateNonparametric method) PintsOptions (class in pybop) (class in pybop.optimisers.base_pints_optimiser) PintsSamplerOptions (class in pybop) (class in pybop.samplers.base_pints_sampler) pio (pybop.plot.plotly_manager.PlotlyManager attribute), [1] (pybop.plot.PlotlyManager attribute), [1] plot() (pybop.FailedSolution method) (pybop.simulators.failed_solution.FailedSolution method) plot_chains() (pybop.samplers.base_sampler.SamplingResult method) plot_contour() (pybop._result.Result method) (pybop.Result method) plot_convergence() (pybop._result.Result method) (pybop.Result method) plot_hessian_eigenvectors() (in module classification) plot_parameters() (pybop._result.Result method) (pybop.Result method) plot_posterior() (pybop.samplers.base_sampler.SamplingResult method) plot_surface() (pybop._result.Result method) (pybop.Result method) plot_trace() (pybop.samplers.base_sampler.SamplingResult method) PlotlyManager (class in pybop.plot) (class in pybop.plot.plotly_manager) polish (pybop.SciPyDifferentialEvolutionOptions attribute) popsize (pybop.SciPyDifferentialEvolutionOptions attribute) PopulationEvaluator (class in pybop) (class in pybop._evaluation) PopulationMCMC (class in pybop) (class in pybop.samplers.pints_samplers) position (pybop.MarginalDistribution property) (pybop.parameters.multivariate_distributions.MarginalDistribution property) post_install_setup() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) posterior (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute), [1] posterior() (in module pybop.plot) (in module pybop.plot.samples) posterior_actual_sample_size_increase (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) posterior_ess_ratio_threshold_evaluation_at_centre (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) posterior_ess_ratio_threshold_resampling (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) posterior_ess_ratio_threshold_skip_feature (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) posterior_gelman_rubin_threshold (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) posterior_model_resample_size_increase (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) preallocate() (pybop.costs.evaluation.Evaluation method) precision_matrices_per_feature (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) precision_matrix (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) Problem (class in pybop) (class in pybop.problems.problem) problem (pybop._evaluation.BaseEvaluator attribute) (pybop._result.Result attribute) (pybop._result.Result property) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.BaseOptimiser property) (pybop.GITTPulseFit attribute) (pybop.optimisers.base_optimiser.BaseOptimiser property) (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute) (pybop.Result attribute) (pybop.Result property) problem() (in module pybop.plot) (in module pybop.plot.problem) problems (pybop.MetaProblem attribute) (pybop.problems.meta_problem.MetaProblem attribute) process_boundary_conditions() (pybop.pybamm.SymbolReplacer method) (pybop.pybamm.utils.SymbolReplacer method) process_chain() (pybop.ChainProcessor method) (pybop.MultiChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) (pybop.samplers.chain_processor.MultiChainProcessor method) (pybop.samplers.chain_processor.SingleChainProcessor method) (pybop.SingleChainProcessor method) process_model() (pybop.pybamm.SymbolReplacer method) (pybop.pybamm.utils.SymbolReplacer method) process_symbol() (pybop.pybamm.SymbolReplacer method) (pybop.pybamm.utils.SymbolReplacer method) prompt_for_plotly_installation() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) properties (pybop.MultivariateGaussian attribute) (pybop.MultivariateLogNormal attribute) (pybop.MultivariateNonparametric attribute) (pybop.MultivariateUniform attribute) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution attribute) (pybop.parameters.multivariate_distributions.MultivariateGaussian attribute) (pybop.parameters.multivariate_distributions.MultivariateLogNormal attribute) (pybop.parameters.multivariate_distributions.MultivariateNonparametric attribute) (pybop.parameters.multivariate_distributions.MultivariateUniform attribute) properties_log_x (pybop.MultivariateLogNormal attribute) (pybop.parameters.multivariate_distributions.MultivariateLogNormal attribute) PSO (class in pybop) (class in pybop.optimisers.pints_optimisers) pulse_fit (pybop.applications.gitt_methods.GITTFit attribute) (pybop.GITTFit attribute) pulse_index (pybop.applications.gitt_methods.GITTFit attribute) (pybop.GITTFit attribute) pybop module

pybop._evaluation module pybop._logging module pybop._result module pybop._utils module pybop._version module pybop.applications module pybop.applications.base_method module pybop.applications.gitt_methods module pybop.applications.ocp_methods module pybop.costs module pybop.costs.base_cost module pybop.costs.design_cost module pybop.costs.error_measures module pybop.costs.evaluation module pybop.costs.feature_distances module pybop.costs.log_likelihoods module pybop.costs.weighted_cost module pybop.models module pybop.models._exponential_decay module pybop.models.lithium_ion module pybop.models.lithium_ion.base_model module pybop.models.lithium_ion.cell_temperature module pybop.models.lithium_ion.grouped_spm module pybop.models.lithium_ion.grouped_spme module pybop.models.lithium_ion.sp_diffusion module pybop.models.lithium_ion.utils module pybop.models.lithium_ion.weppner_huggins module pybop.optimisers module pybop.optimisers._adamw module pybop.optimisers._cuckoo module pybop.optimisers._gradient_descent module pybop.optimisers._irprop_plus module pybop.optimisers._random_search module pybop.optimisers._simulated_annealing module pybop.optimisers.base_optimiser module pybop.optimisers.base_pints_optimiser module pybop.optimisers.ep_bolfi_optimiser module pybop.optimisers.pints_optimisers module pybop.optimisers.scipy_optimisers module pybop.parameters module pybop.parameters.distributions module pybop.parameters.multivariate_distributions module pybop.parameters.parameter module pybop.plot module pybop.plot.contour module pybop.plot.convergence module pybop.plot.dataset module pybop.plot.nyquist module pybop.plot.parameters module pybop.plot.plotly_manager module pybop.plot.problem module pybop.plot.samples module pybop.plot.standard_plots module pybop.plot.voronoi module pybop.problems module pybop.problems.log_pdf module pybop.problems.meta_problem module pybop.problems.problem module pybop.pybamm module pybop.pybamm.design_variables module pybop.pybamm.eis_simulator module pybop.pybamm.parameter_utils module pybop.pybamm.simulator module pybop.pybamm.utils module pybop.samplers module pybop.samplers.base_pints_sampler module pybop.samplers.base_sampler module pybop.samplers.chain_processor module pybop.samplers.pints_samplers module pybop.simulators module pybop.simulators.base_simulator module pybop.simulators.failed_solution module pybop.simulators.solution module PyprobeResult (class in dataset)

R

R0() (pybop.models.lithium_ion.sp_diffusion.SPDiffusion method) (pybop.models.lithium_ion.SPDiffusion method) RandomSearch (class in pybop) (class in pybop.optimisers.pints_optimisers) RandomSearchImpl (class in pybop.optimisers) (class in pybop.optimisers._random_search) RaoBlackwellACMC (class in pybop) (class in pybop.samplers.pints_samplers) recombination (pybop.SciPyDifferentialEvolutionOptions attribute) RecommendedSolver (class in pybop.pybamm) (class in pybop.pybamm.utils) relative_tolerance (pybop.optimisers.base_pints_optimiser.PintsOptions attribute), [1] (pybop.PintsOptions attribute), [1] RelativisticMCMC (class in pybop) (class in pybop.samplers.pints_samplers) remove_brackets() (pybop.plot.standard_plots.StandardPlot static method) (pybop.plot.StandardPlot static method) requires_model_rebuild (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator property) reset() (pybop._logging.Logger method) (pybop.Logger method) Result (class in pybop) (class in pybop._result) rhat() (pybop.samplers.base_sampler.SamplingResult method) rhs (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) RootMeanSquaredError (class in pybop) (class in pybop.costs.error_measures)

run() (pybop.BaseOptimiser method) (pybop.BasePintsSampler method) (pybop.BaseSampler method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) (pybop.samplers.base_sampler.BaseSampler method) running() (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.optimisers.AdamWImpl method) (pybop.optimisers.CuckooSearchImpl method) (pybop.optimisers.GradientDescentImpl method) (pybop.optimisers.IRPropPlusImpl method) (pybop.optimisers.RandomSearchImpl method) (pybop.optimisers.SimulatedAnnealingImpl method) rvs() (pybop.Distribution method) (pybop.JointDistribution method) (pybop.MultivariateLogNormal method) (pybop.MultivariateNonparametric method) (pybop.parameters.distributions.Distribution method) (pybop.parameters.distributions.JointDistribution method) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution method) (pybop.parameters.multivariate_distributions.MultivariateLogNormal method) (pybop.parameters.multivariate_distributions.MultivariateNonparametric method)

S

sample_from_distribution() (pybop.Parameter method) (pybop.Parameters method) (pybop.parameters.parameter.Parameter method) (pybop.parameters.parameter.Parameters method) sampled_logpdf (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) sampled_prior (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) sampler (pybop.ChainProcessor attribute) (pybop.samplers.base_sampler.SamplingResult attribute) (pybop.samplers.chain_processor.ChainProcessor attribute) SamplerOptions (class in pybop) (class in pybop.samplers.base_sampler) samplers (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) SamplingResult (class in pybop.samplers.base_sampler) save() (pybop._result.Result method) (pybop.FailedSolution method) (pybop.Result method) (pybop.simulators.failed_solution.FailedSolution method) save_data() (pybop._result.Result method) (pybop.Result method) save_data_dict() (in module pybop) (in module pybop._utils) ScalarEvaluator (class in pybop) (class in pybop._evaluation) scale (pybop.Exponential attribute) (pybop.Gaussian attribute) (pybop.parameters.distributions.Exponential attribute) (pybop.parameters.distributions.Gaussian attribute) ScaledTransformation (class in transformations) scipy_bounds() (pybop.BaseSciPyOptimiser method) scipy_result (pybop._result.Result property) (pybop.optimisers.base_optimiser.OptimisationResult attribute) (pybop.Result property) SciPyDifferentialEvolution (class in pybop) (class in pybop.optimisers.scipy_optimisers) SciPyDifferentialEvolutionOptions (class in pybop) SciPyMinimize (class in pybop) (class in pybop.optimisers.scipy_optimisers) SciPyMinimizeOptions (class in pybop) script_path (in module pybop) seed (pybop.EPBOLFIOptions attribute) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions attribute) (pybop.SciPyDifferentialEvolutionOptions attribute) sensitivities (pybop.costs.evaluation.Evaluation attribute) (pybop.FailedVariable attribute) (pybop.simulators.failed_solution.FailedVariable attribute) (pybop.simulators.solution.SolutionVariable attribute) sensitivity_analysis module sensitivity_analysis() (in module sensitivity_analysis) (pybop.Problem method) (pybop.problems.problem.Problem method) SequentialEvaluator (class in pybop) (class in pybop._evaluation) set() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) set_f_guessed_tracking() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_fail_gradient() (pybop.costs.base_cost.BaseCost method) set_formation_concentrations() (in module pybop.pybamm) (in module pybop.pybamm.parameter_utils) set_hyper_parameters() (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers.GradientDescentImpl method) set_initial_phase_iterations() (pybop.BaseSampler method) (pybop.samplers.base_sampler.BaseSampler method) set_initial_state() (pybop.models.lithium_ion.base_model.BaseGroupedModel static method) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion static method) (pybop.models.lithium_ion.SPDiffusion static method) (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins static method) (pybop.models.lithium_ion.WeppnerHuggins static method) set_learning_rate() (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers.GradientDescentImpl method) set_max_evaluations() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_max_iterations() (pybop.BasePintsOptimiser method) (pybop.BaseSampler method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) (pybop.samplers.base_sampler.BaseSampler method) set_max_unchanged_iterations() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_min_iterations() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_output_variables() (pybop.BaseSimulator method) (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) (pybop.simulators.base_simulator.BaseSimulator method) set_population_size() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_sigma() (pybop.costs.log_likelihoods.GaussianLogLikelihood method) (pybop.costs.log_likelihoods.GaussianLogLikelihoodKnownSigma method) (pybop.costs.log_likelihoods.LogLikelihood method) (pybop.GaussianLogLikelihood method) (pybop.GaussianLogLikelihoodKnownSigma method) (pybop.LogLikelihood method) set_solution_variable() (pybop.simulators.solution.Solution method) (pybop.Solution method) set_target() (pybop.costs.base_cost.BaseCost method) (pybop.costs.weighted_cost.WeightedCost method) (pybop.MetaProblem method) (pybop.Problem method) (pybop.problems.meta_problem.MetaProblem method) (pybop.problems.problem.Problem method) (pybop.WeightedCost method)

set_threshold() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_up_for_eis() (pybop.pybamm.eis_simulator.EISSimulator method) (pybop.pybamm.EISSimulator method) set_warm_up_iterations() (pybop.BaseSampler method) (pybop.samplers.base_sampler.BaseSampler method) set_weighting() (pybop.costs.error_measures.ErrorMeasure method) (pybop.ErrorMeasure method) sigma (pybop.costs.log_likelihoods.LogLikelihood attribute) (pybop.LogLikelihood attribute) (pybop.MultivariateGaussian property) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution property) (pybop.parameters.multivariate_distributions.MultivariateGaussian property) sigma2 (pybop.MultivariateGaussian attribute) (pybop.MultivariateLogNormal attribute) (pybop.parameters.multivariate_distributions.MultivariateGaussian attribute) (pybop.parameters.multivariate_distributions.MultivariateLogNormal attribute) signif() (pybop.samplers.base_sampler.SamplingResult method) simulate() (pybop.Problem method) (pybop.problems.problem.Problem method) simulate_batch() (pybop.Problem method) (pybop.problems.problem.Problem method) SimulatedAnnealing (class in pybop) (class in pybop.optimisers.pints_optimisers) SimulatedAnnealingImpl (class in pybop.optimisers) (class in pybop.optimisers._simulated_annealing) simulation (pybop.pybamm.eis_simulator.EISSimulator property) (pybop.pybamm.EISSimulator property) Simulator (class in pybop.pybamm) (class in pybop.pybamm.simulator) simulator (pybop.Problem property) (pybop.problems.problem.Problem property) single_chain (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) SingleChainProcessor (class in pybop) (class in pybop.samplers.chain_processor) SliceDoublingMCMC (class in pybop) (class in pybop.samplers.pints_samplers) SliceRankShrinkingMCMC (class in pybop) (class in pybop.samplers.pints_samplers) SliceStepoutMCMC (class in pybop) (class in pybop.samplers.pints_samplers) SNES (class in pybop) (class in pybop.optimisers.pints_optimisers) Solution (class in pybop) (class in pybop.simulators.solution) SolutionVariable (class in pybop.simulators.solution) solve() (pybop.BaseSimulator method) (pybop.pybamm.eis_simulator.EISSimulator method) (pybop.pybamm.EISSimulator method) (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) (pybop.simulators.base_simulator.BaseSimulator method) solve_batch() (pybop.BaseSimulator method) (pybop.pybamm.eis_simulator.EISSimulator method) (pybop.pybamm.EISSimulator method) (pybop.pybamm.Simulator method) (pybop.pybamm.simulator.Simulator method) (pybop.simulators.base_simulator.BaseSimulator method) solve_time (pybop.FailedSolution attribute) (pybop.simulators.failed_solution.FailedSolution attribute) solver (pybop.pybamm.Simulator property) (pybop.pybamm.simulator.Simulator property) solver_options (pybop.SciPyMinimizeOptions attribute), [1] SPDiffusion (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.sp_diffusion) SquareRootFeatureDistance (class in pybop) (class in pybop.costs.feature_distances) stack_sensitivities() (pybop.costs.base_cost.BaseCost method) StandardPlot (class in pybop.plot) (class in pybop.plot.standard_plots) StandardSubplot (class in pybop.plot) (class in pybop.plot.standard_plots) start_index (pybop.costs.feature_distances.FeatureDistance attribute) std() (pybop.Distribution method) (pybop.MarginalDistribution method) (pybop.parameters.distributions.Distribution method) (pybop.parameters.multivariate_distributions.MarginalDistribution method) step_max (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute), [1] (pybop.optimisers.IRPropPlusImpl attribute), [1] step_min (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute), [1] (pybop.optimisers.IRPropPlusImpl attribute), [1] step_size (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers.CuckooSearchImpl attribute) store_samples() (pybop.ChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) strategy (pybop.SciPyDifferentialEvolutionOptions attribute) subplot_options (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) summary_table() (in module pybop.plot) (in module pybop.plot.samples) (pybop.samplers.base_sampler.SamplingResult method) SumOfPower (class in pybop) (class in pybop.costs.error_measures) SumSquaredError (class in pybop) (class in pybop.costs.error_measures) support() (pybop.Distribution method) (pybop.parameters.distributions.Distribution method) surface() (in module pybop.plot) (in module pybop.plot.voronoi) SymbolReplacer (class in pybop.pybamm) (class in pybop.pybamm.utils)

T

t_eval (pybop.FailedSolution property) (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) (pybop.simulators.failed_solution.FailedSolution property) t_interp (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) target (pybop.costs.base_cost.BaseCost property) (pybop.costs.weighted_cost.WeightedCost property) (pybop.Problem property) (pybop.problems.problem.Problem property) (pybop.WeightedCost property) target_data (pybop.costs.base_cost.BaseCost property) (pybop.costs.error_measures.ErrorMeasure attribute) (pybop.ErrorMeasure attribute) (pybop.Problem attribute) (pybop.Problem property) (pybop.problems.problem.Problem attribute) (pybop.problems.problem.Problem property) tau_d() (pybop.models.lithium_ion.sp_diffusion.SPDiffusion method) (pybop.models.lithium_ion.SPDiffusion method) tell() (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.optimisers.AdamWImpl method) (pybop.optimisers.CuckooSearchImpl method) (pybop.optimisers.GradientDescentImpl method) (pybop.optimisers.IRPropPlusImpl method) (pybop.optimisers.RandomSearchImpl method) (pybop.optimisers.SimulatedAnnealingImpl method) temperature (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl property) (pybop.optimisers.SimulatedAnnealingImpl property) termination (pybop.FailedSolution attribute) (pybop.simulators.failed_solution.FailedSolution attribute) threshold (pybop.optimisers.base_pints_optimiser.PintsOptions attribute), [1] (pybop.PintsOptions attribute), [1] time (pybop._result.Result attribute) (pybop._result.Result property) (pybop.optimisers.base_optimiser.OptimisationResult attribute) (pybop.Result attribute) (pybop.Result property) (pybop.samplers.base_sampler.SamplingResult attribute) time_end (pybop.costs.feature_distances.FeatureDistance attribute)

time_start (pybop.costs.feature_distances.FeatureDistance attribute) to_dict() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.SciPyDifferentialEvolutionOptions method) (pybop.SciPyMinimizeOptions method) to_inputs_list() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) to_model() (base_transformation.Transformation method) to_search() (base_transformation.Transformation method) tol (pybop.SciPyDifferentialEvolutionOptions attribute) (pybop.SciPyMinimizeOptions attribute), [1] total_evaluations() (pybop._result.Result method) (pybop.Result method) total_iterations() (pybop._result.Result method) (pybop.Result method) total_runtime() (pybop._result.Result method) (pybop.Result method) trace() (in module pybop.plot) (in module pybop.plot.samples) trace_name_width (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) trace_options (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) traces (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) trajectories() (in module pybop.plot) (in module pybop.plot.standard_plots) Transformation (class in base_transformation) transformation (pybop._evaluation.BaseEvaluator attribute) (pybop.Parameter property) (pybop.Parameters property) (pybop.parameters.parameter.Parameter property) (pybop.parameters.parameter.Parameters property) transformations module transformations (transformations.ComposedTransformation property) transformed_distribution_properties (pybop.Parameters property) (pybop.parameters.parameter.Parameters property) transformed_properties() (pybop.MultivariateGaussian method) (pybop.MultivariateLogNormal method) (pybop.MultivariateNonparametric method) (pybop.parameters.multivariate_distributions.BaseMultivariateDistribution method) (pybop.parameters.multivariate_distributions.MultivariateGaussian method) (pybop.parameters.multivariate_distributions.MultivariateLogNormal method) (pybop.parameters.multivariate_distributions.MultivariateNonparametric method) truncate_region_by_axis() (in module pybop.plot.voronoi)

U

U() (pybop.models.lithium_ion.cell_temperature.CellTemperature method) (pybop.models.lithium_ion.CellTemperature method) (pybop.models.lithium_ion.grouped_spm.GroupedSPM method) (pybop.models.lithium_ion.grouped_spme.GroupedSPMe method) (pybop.models.lithium_ion.GroupedSPM method) (pybop.models.lithium_ion.GroupedSPMe method) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion method) (pybop.models.lithium_ion.SPDiffusion method) Uniform (class in pybop) (class in pybop.parameters.distributions) UnitHyperCube (class in transformations) update() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method)

update_accepted_sample() (pybop.ChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) update_distribution() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) update_initial_value() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) upper (pybop.parameters.distributions.Uniform attribute) (pybop.parameters.parameter.Bounds attribute), [1] (pybop.Uniform attribute) (transformations.UnitHyperCube attribute), [1] upper_bounds (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute), [1] use_f_guessed (pybop.optimisers.base_pints_optimiser.PintsOptions attribute), [1] (pybop.PintsOptions attribute), [1]

V

validate() (pybop.EPBOLFIOptions method) (pybop.OptimiserOptions method) (pybop.optimisers.base_optimiser.OptimiserOptions method) (pybop.optimisers.base_pints_optimiser.PintsOptions method) (pybop.optimisers.ep_bolfi_optimiser.EPBOLFIOptions method) (pybop.PintsOptions method) (pybop.PintsSamplerOptions method) (pybop.SamplerOptions method) (pybop.samplers.base_pints_sampler.PintsSamplerOptions method) (pybop.samplers.base_sampler.SamplerOptions method) (pybop.SciPyMinimizeOptions method) values (pybop.costs.evaluation.Evaluation attribute) values() (pybop.FailedSolution method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.simulators.failed_solution.FailedSolution method) variable_names (pybop.FailedSolution property) (pybop.simulators.failed_solution.FailedSolution property) variables (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.lithium_ion.cell_temperature.CellTemperature attribute) (pybop.models.lithium_ion.CellTemperature attribute) (pybop.models.lithium_ion.grouped_spm.GroupedSPM attribute) (pybop.models.lithium_ion.grouped_spme.GroupedSPMe attribute) (pybop.models.lithium_ion.GroupedSPM attribute) (pybop.models.lithium_ion.GroupedSPMe attribute) (pybop.models.lithium_ion.sp_diffusion.SPDiffusion attribute) (pybop.models.lithium_ion.SPDiffusion attribute) (pybop.models.lithium_ion.weppner_huggins.WeppnerHuggins attribute) (pybop.models.lithium_ion.WeppnerHuggins attribute)

verbose (pybop._logging.Logger attribute) (pybop.BaseOptimiser attribute) (pybop.Logger attribute) (pybop.OptimiserOptions attribute), [1] (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.OptimiserOptions attribute), [1] (pybop.PintsSamplerOptions attribute), [1] (pybop.pybamm.Simulator attribute) (pybop.pybamm.simulator.Simulator attribute) (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute), [1] verbose_print_rate (pybop._logging.Logger attribute) (pybop.BaseOptimiser attribute) (pybop.Logger attribute) (pybop.OptimiserOptions attribute), [1] (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.OptimiserOptions attribute), [1] verify() (pybop.Distribution method) (pybop.parameters.distributions.Distribution method) verify_input() (base_transformation.Transformation method) verify_inputs() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) verify_prediction() (pybop.costs.error_measures.ErrorMeasure method) (pybop.ErrorMeasure method)

W

warm_up_iterations (pybop.PintsSamplerOptions attribute), [1] (pybop.samplers.base_pints_sampler.PintsSamplerOptions attribute), [1] WeightedCost (class in pybop) (class in pybop.costs.weighted_cost)

WeppnerHuggins (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.weppner_huggins) width() (pybop.parameters.parameter.Bounds method) wrap_text() (pybop.plot.standard_plots.StandardPlot static method) (pybop.plot.StandardPlot static method)

X

x (pybop._result.Result property) (pybop.Interpolant attribute) (pybop.models.lithium_ion.utils.Interpolant attribute) (pybop.optimisers.ep_bolfi_optimiser.BayesianOptimisationResult attribute) (pybop.Result property) x0 (pybop._logging.Logger property) (pybop._result.Result property) (pybop.Logger property) (pybop.Result property) x_best() (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.optimisers.AdamWImpl method) (pybop.optimisers.CuckooSearchImpl method) (pybop.optimisers.GradientDescentImpl method) (pybop.optimisers.IRPropPlusImpl method) (pybop.optimisers.RandomSearchImpl method) (pybop.optimisers.SimulatedAnnealingImpl method)

x_guessed() (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers.AdamWImpl method) x_model (pybop._result.Result property) (pybop.Result property) XNES (class in pybop) (class in pybop.optimisers.pints_optimisers)

Y

y (pybop.Interpolant attribute) (pybop.models.lithium_ion.utils.Interpolant attribute)

Z

z_scale (pybop.pybamm.eis_simulator.EISSimulator attribute) (pybop.pybamm.EISSimulator attribute)