Index

_

__call__() (pybop.BaseCost method) (pybop.costs.base_cost.BaseCost method) (pybop.plotting.quick_plot.StandardPlot method) (pybop.plotting.quick_plot.StandardSubplot method) (pybop.StandardPlot method) (pybop.StandardSubplot method) __getitem__() (pybop._dataset.Dataset method) (pybop.Dataset method) __len__() (pybop.models.base_model.TimeSeriesState method) (pybop.TimeSeriesState method) __repr__() (pybop._dataset.Dataset method) (pybop.Dataset method) (pybop.Exponential method) (pybop.Gaussian method) (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) (pybop.parameters.priors.Exponential method) (pybop.parameters.priors.Gaussian method) (pybop.parameters.priors.Uniform method) (pybop.Uniform method) __version__ (in module pybop) (in module pybop._version) _check_params() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.models.empirical.ECircuitModel method) (pybop.models.empirical.ecm.Thevenin method) (pybop.models.empirical.ecm_base.ECircuitModel method) (pybop.models.empirical.Thevenin method) (pybop.models.lithium_ion.echem_base.EChemBaseModel method) (pybop.models.lithium_ion.EChemBaseModel method) _evaluate() (pybop.BaseCost method) (pybop.costs._likelihoods.GaussianLogLikelihood method) (pybop.costs._likelihoods.GaussianLogLikelihoodKnownSigma method) (pybop.costs.base_cost.BaseCost method) (pybop.costs.design_costs.DesignCost method) (pybop.costs.design_costs.GravimetricEnergyDensity method) (pybop.costs.design_costs.VolumetricEnergyDensity method) (pybop.costs.fitting_costs.ObserverCost method) (pybop.costs.fitting_costs.RootMeanSquaredError method) (pybop.costs.fitting_costs.SumSquaredError method) (pybop.DesignCost method) (pybop.GaussianLogLikelihood method) (pybop.GaussianLogLikelihoodKnownSigma method) (pybop.GravimetricEnergyDensity method) (pybop.ObserverCost method) (pybop.RootMeanSquaredError method) (pybop.SumSquaredError method) (pybop.VolumetricEnergyDensity method)

_evaluateS1() (pybop.BaseCost method) (pybop.costs._likelihoods.GaussianLogLikelihood method) (pybop.costs._likelihoods.GaussianLogLikelihoodKnownSigma method) (pybop.costs.base_cost.BaseCost method) (pybop.costs.fitting_costs.RootMeanSquaredError method) (pybop.costs.fitting_costs.SumSquaredError method) (pybop.GaussianLogLikelihood method) (pybop.GaussianLogLikelihoodKnownSigma method) (pybop.RootMeanSquaredError method) (pybop.SumSquaredError method) _handle_special_cases() (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method) _logpi (pybop.costs._likelihoods.GaussianLogLikelihood attribute) (pybop.costs._likelihoods.GaussianLogLikelihoodKnownSigma attribute) (pybop.GaussianLogLikelihood attribute) (pybop.GaussianLogLikelihoodKnownSigma attribute) _n_parameters (pybop._optimisation.Optimisation attribute) (pybop.Optimisation attribute) _run_pints() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) _run_pybop() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) _runoptimise() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution method) (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.SciPyDifferentialEvolution method) (pybop.SciPyMinimize method)

A

Adam (class in pybop) (class in pybop.optimisers.pints_optimisers) approximate_capacity() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.models.lithium_ion.echem_base.EChemBaseModel method) (pybop.models.lithium_ion.EChemBaseModel method)

as_ndarray() (pybop.models.base_model.TimeSeriesState method) (pybop.TimeSeriesState method)

B

BaseCost (class in pybop) (class in pybop.costs.base_cost) BaseLikelihood (class in pybop) (class in pybop.costs._likelihoods) BaseModel (class in pybop) (class in pybop.models.base_model) BaseOptimiser (class in pybop) (class in pybop.optimisers.base_optimiser)

BaseProblem (class in pybop) (class in pybop._problem) bounds (pybop._optimisation.Optimisation attribute) (pybop.Optimisation attribute) build() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) built_model (pybop.BaseModel property) (pybop.models.base_model.BaseModel property)

C

cell_mass() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.models.lithium_ion.echem_base.EChemBaseModel method) (pybop.models.lithium_ion.EChemBaseModel method) cell_volume() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.models.lithium_ion.echem_base.EChemBaseModel method) (pybop.models.lithium_ion.EChemBaseModel method) check() (pybop._dataset.Dataset method) (pybop.Dataset method) check_browser_availability() (pybop.PlotlyManager method) (pybop.plotting.plotly_manager.PlotlyManager method) check_optimal_parameters() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) check_params() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method)

check_renderer_settings() (pybop.PlotlyManager method) (pybop.plotting.plotly_manager.PlotlyManager method) cholupdate() (pybop.observers.unscented_kalman.SquareRootUKF static method) classify_and_update_parameters() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) CMAES (class in pybop) (class in pybop.optimisers.pints_optimisers) copy() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) Covariance (pybop.Observer attribute) (pybop.observers.observer.Observer attribute) (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver attribute) (pybop.UnscentedKalmanFilterObserver attribute) create_trace() (pybop.plotting.quick_plot.StandardPlot method) (pybop.StandardPlot method)

D

Dataset (class in pybop) (class in pybop._dataset) DEFAULT_LAYOUT_OPTIONS (in module pybop.plotting.quick_plot) DEFAULT_SUBPLOT_OPTIONS (in module pybop.plotting.quick_plot) DEFAULT_SUBPLOT_TRACE_OPTIONS (in module pybop.plotting.quick_plot)

DEFAULT_TRACE_OPTIONS (in module pybop.plotting.quick_plot) DesignCost (class in pybop) (class in pybop.costs.design_costs) DesignProblem (class in pybop) (class in pybop._problem)

E

EChemBaseModel (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem_base) ECircuitModel (class in pybop.models.empirical) (class in pybop.models.empirical.ecm_base) ensure_plotly_installed() (pybop.PlotlyManager method) (pybop.plotting.plotly_manager.PlotlyManager method) evaluate() (pybop._problem.BaseProblem method) (pybop._problem.DesignProblem method) (pybop._problem.FittingProblem method) (pybop.BaseCost method) (pybop.BaseProblem method) (pybop.costs.base_cost.BaseCost method) (pybop.DesignProblem method) (pybop.FittingProblem method) (pybop.Observer method) (pybop.observers.observer.Observer method)

evaluateS1() (pybop._problem.BaseProblem method) (pybop._problem.FittingProblem method) (pybop.BaseCost method) (pybop.BaseProblem method) (pybop.costs.base_cost.BaseCost method) (pybop.costs.fitting_costs.ObserverCost method) (pybop.FittingProblem method) (pybop.ObserverCost method) Experiment (class in pybop) (class in pybop._experiment) Exponential (class in pybop) (class in pybop.parameters.priors) export_parameters() (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method)

F

f_guessed_tracking() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) filtered_cholupdate() (pybop.observers.unscented_kalman.SquareRootUKF static method)

FittingProblem (class in pybop) (class in pybop._problem) FLOAT_FORMAT (in module pybop)

G

Gaussian (class in pybop) (class in pybop.parameters.priors) GaussianLogLikelihood (class in pybop) (class in pybop.costs._likelihoods) GaussianLogLikelihoodKnownSigma (class in pybop) (class in pybop.costs._likelihoods) gen_sigma_points() (pybop.observers.unscented_kalman.SquareRootUKF static method) geometry (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) get_current_covariance() (pybop.Observer method) (pybop.observers.observer.Observer method) (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver method) (pybop.UnscentedKalmanFilterObserver method) get_current_measure() (pybop.Observer method) (pybop.observers.observer.Observer method) get_current_state() (pybop.Observer method) (pybop.observers.observer.Observer method)

get_current_time() (pybop.Observer method) (pybop.observers.observer.Observer method) get_measure() (pybop.Observer method) (pybop.observers.observer.Observer method) get_n_parameters() (pybop.BaseLikelihood method) (pybop.costs._likelihoods.BaseLikelihood method) get_param_bounds() (in module pybop.plotting.plot2d) get_sigma() (pybop.BaseLikelihood method) (pybop.costs._likelihoods.BaseLikelihood method) get_state() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) go (pybop.PlotlyManager attribute) (pybop.plotting.plotly_manager.PlotlyManager attribute) GradientDescent (class in pybop) (class in pybop.optimisers.pints_optimisers) GravimetricEnergyDensity (class in pybop) (class in pybop.costs.design_costs)

H

hypot() (pybop.observers.unscented_kalman.SquareRootUKF method)

I

import_parameters() (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method) Inputs (in module pybop) (in module pybop.models.base_model) inputs (pybop.models.base_model.TimeSeriesState attribute) (pybop.TimeSeriesState attribute) install_plotly() (pybop.PlotlyManager method) (pybop.plotting.plotly_manager.PlotlyManager method)

Interpolant() (pybop._dataset.Dataset method) (pybop.Dataset method) IRPropMin (class in pybop) (class in pybop.optimisers.pints_optimisers) is_json_serializable() (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method) is_numeric() (in module pybop) (in module pybop._utils)

L

log (pybop._optimisation.Optimisation attribute) (pybop.Optimisation attribute) log_likelihood() (pybop.Observer method) (pybop.observers.observer.Observer method) logpdf() (pybop.Exponential method) (pybop.Gaussian method) (pybop.parameters.priors.Exponential method) (pybop.parameters.priors.Gaussian method) (pybop.parameters.priors.Uniform method) (pybop.Uniform method)

M

make_subplots (pybop.PlotlyManager attribute) (pybop.plotting.plotly_manager.PlotlyManager attribute) mean (pybop.Exponential property) (pybop.parameters.priors.Exponential property) (pybop.parameters.priors.Uniform property) (pybop.Uniform property) mesh (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) model (pybop._problem.BaseProblem property) (pybop.BaseProblem property) model_with_set_params (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) module pybop pybop._dataset pybop._experiment pybop._optimisation pybop._problem pybop._utils pybop._version pybop.costs pybop.costs._likelihoods pybop.costs.base_cost pybop.costs.design_costs pybop.costs.fitting_costs pybop.models pybop.models.base_model pybop.models.empirical pybop.models.empirical.ecm pybop.models.empirical.ecm_base pybop.models.lithium_ion pybop.models.lithium_ion.echem pybop.models.lithium_ion.echem_base pybop.observers pybop.observers.observer pybop.observers.unscented_kalman pybop.optimisers pybop.optimisers.base_optimiser pybop.optimisers.pints_optimisers pybop.optimisers.scipy_optimisers pybop.parameters pybop.parameters.parameter pybop.parameters.parameter_set pybop.parameters.priors pybop.plotting pybop.plotting.plot2d pybop.plotting.plot_convergence pybop.plotting.plot_dataset pybop.plotting.plot_parameters pybop.plotting.plot_problem pybop.plotting.plotly_manager pybop.plotting.quick_plot

N

n_parameters (pybop.BaseCost property) (pybop.costs.base_cost.BaseCost property) name() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution method) (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.SciPyDifferentialEvolution method) (pybop.SciPyMinimize method)

needs_sensitivities() (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution method) (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.SciPyDifferentialEvolution method) (pybop.SciPyMinimize method)

O

observe() (pybop.Observer method) (pybop.observers.observer.Observer method) (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver method) (pybop.UnscentedKalmanFilterObserver method) Observer (class in pybop) (class in pybop.observers.observer)

ObserverCost (class in pybop) (class in pybop.costs.fitting_costs) Optimisation (class in pybop) (class in pybop._optimisation) optimise() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method)

P

Parameter (class in pybop) (class in pybop.parameters.parameter) parameter_set (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) ParameterSet (class in pybop) (class in pybop.parameters.parameter_set) pdf() (pybop.Exponential method) (pybop.Gaussian method) (pybop.parameters.priors.Exponential method) (pybop.parameters.priors.Gaussian method) (pybop.parameters.priors.Uniform method) (pybop.Uniform method) pio (pybop.PlotlyManager attribute) (pybop.plotting.plotly_manager.PlotlyManager attribute) plot2d() (in module pybop) (in module pybop.plotting.plot2d) plot_convergence() (in module pybop) (in module pybop.plotting.plot_convergence) plot_dataset() (in module pybop) (in module pybop.plotting.plot_dataset) plot_parameters() (in module pybop) (in module pybop.plotting.plot_parameters) plot_trajectories() (in module pybop) (in module pybop.plotting.quick_plot) PlotlyManager (class in pybop) (class in pybop.plotting.plotly_manager) post_install_setup() (pybop.PlotlyManager method) (pybop.plotting.plotly_manager.PlotlyManager method) predict() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) prompt_for_plotly_installation() (pybop.PlotlyManager method) (pybop.plotting.plotly_manager.PlotlyManager method) PSO (class in pybop) (class in pybop.optimisers.pints_optimisers) pybamm() (pybop.parameters.parameter_set.ParameterSet class method) (pybop.ParameterSet class method) pybop module pybop._dataset module pybop._experiment module pybop._optimisation module pybop._problem module pybop._utils module pybop._version module pybop.costs module pybop.costs._likelihoods module pybop.costs.base_cost module pybop.costs.design_costs module

pybop.costs.fitting_costs module pybop.models module pybop.models.base_model module pybop.models.empirical module pybop.models.empirical.ecm module pybop.models.empirical.ecm_base module pybop.models.lithium_ion module pybop.models.lithium_ion.echem module pybop.models.lithium_ion.echem_base module pybop.observers module pybop.observers.observer module pybop.observers.unscented_kalman module pybop.optimisers module pybop.optimisers.base_optimiser module pybop.optimisers.pints_optimisers module pybop.optimisers.scipy_optimisers module pybop.parameters module pybop.parameters.parameter module pybop.parameters.parameter_set module pybop.parameters.priors module pybop.plotting module pybop.plotting.plot2d module pybop.plotting.plot_convergence module pybop.plotting.plot_dataset module pybop.plotting.plot_parameters module pybop.plotting.plot_problem module pybop.plotting.plotly_manager module pybop.plotting.quick_plot module

Q

quick_plot() (in module pybop) (in module pybop.plotting.plot_problem)

R

rebuild() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) reinit() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) remove_brackets() (pybop.plotting.quick_plot.StandardPlot static method) (pybop.StandardPlot static method) reset() (pybop.Observer method) (pybop.observers.observer.Observer method) (pybop.observers.unscented_kalman.SquareRootUKF method) (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver method) (pybop.UnscentedKalmanFilterObserver method)

RootMeanSquaredError (class in pybop) (class in pybop.costs.fitting_costs) run() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) rvs() (pybop.Exponential method) (pybop.Gaussian method) (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) (pybop.parameters.priors.Exponential method) (pybop.parameters.priors.Gaussian method) (pybop.parameters.priors.Uniform method) (pybop.Uniform method)

S

SciPyDifferentialEvolution (class in pybop) (class in pybop.optimisers.scipy_optimisers) SciPyMinimize (class in pybop) (class in pybop.optimisers.scipy_optimisers) script_path (in module pybop) set_bounds() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) set_f_guessed_tracking() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) set_fail_gradient() (pybop.costs.fitting_costs.RootMeanSquaredError method) (pybop.costs.fitting_costs.SumSquaredError method) (pybop.RootMeanSquaredError method) (pybop.SumSquaredError method) set_init_soc() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) set_margin() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) set_max_evaluations() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) set_max_iterations() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) set_max_unchanged_iterations() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) set_min_iterations() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) set_parallel() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) set_params() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) set_population_size() (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution method) (pybop.SciPyDifferentialEvolution method) set_rebuild_parameters() (pybop.models.lithium_ion.echem_base.EChemBaseModel method) (pybop.models.lithium_ion.EChemBaseModel method) set_sigma() (pybop.BaseLikelihood method) (pybop.costs._likelihoods.BaseLikelihood method) sigma (pybop.Exponential property) (pybop.parameters.priors.Exponential property) (pybop.parameters.priors.Uniform property) (pybop.Uniform property)

sigma0 (pybop._optimisation.Optimisation attribute) (pybop.Optimisation attribute) SigmaPoint (class in pybop.observers.unscented_kalman) simulate() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) simulateS1() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) SNES (class in pybop) (class in pybop.optimisers.pints_optimisers) sol (pybop.models.base_model.TimeSeriesState attribute) (pybop.TimeSeriesState attribute) solver (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) spatial_methods (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) SPM (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) SPMe (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) SquareRootUKF (class in pybop.observers.unscented_kalman) StandardPlot (class in pybop) (class in pybop.plotting.quick_plot) StandardSubplot (class in pybop) (class in pybop.plotting.quick_plot) step() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.observers.unscented_kalman.SquareRootUKF method) store_optimised_parameters() (pybop._optimisation.Optimisation method) (pybop.Optimisation method) submesh_types (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) SumSquaredError (class in pybop) (class in pybop.costs.fitting_costs)

T

t (pybop.models.base_model.TimeSeriesState attribute) (pybop.TimeSeriesState attribute) target() (pybop._problem.BaseProblem method) (pybop.BaseProblem method) Thevenin (class in pybop.models.empirical) (class in pybop.models.empirical.ecm)

time_data() (pybop._problem.BaseProblem method) (pybop.BaseProblem method) TimeSeriesState (class in pybop) (class in pybop.models.base_model)

U

Uniform (class in pybop) (class in pybop.parameters.priors) unscented_transform() (pybop.observers.unscented_kalman.SquareRootUKF static method) UnscentedKalmanFilterObserver (class in pybop) (class in pybop.observers.unscented_kalman)

update() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) update_simulation_data() (pybop.costs.design_costs.DesignCost method) (pybop.DesignCost method)

V

var_pts (pybop.BaseModel property) (pybop.models.base_model.BaseModel property)

VolumetricEnergyDensity (class in pybop) (class in pybop.costs.design_costs)

W

w_c (pybop.observers.unscented_kalman.SigmaPoint attribute) w_m (pybop.observers.unscented_kalman.SigmaPoint attribute)

wrap_text() (pybop.plotting.quick_plot.StandardPlot static method) (pybop.StandardPlot static method)

X

x (pybop.observers.unscented_kalman.SigmaPoint attribute) x0 (pybop._optimisation.Optimisation attribute) (pybop.Optimisation attribute)

XNES (class in pybop) (class in pybop.optimisers.pints_optimisers)