Index

_

__call__() (pybop.applications.base_method.Interpolant method) (pybop.applications.base_method.InverseOCV method) (pybop.applications.gitt_methods.GITTFit method) (pybop.applications.gitt_methods.GITTPulseFit method) (pybop.applications.ocp_methods.OCPAverage method) (pybop.applications.ocp_methods.OCPCapacityToStoichiometry method) (pybop.applications.ocp_methods.OCPMerge method) (pybop.BaseCost method) (pybop.BasePrior method) (pybop.costs.base_cost.BaseCost method) (pybop.GITTFit method) (pybop.GITTPulseFit method) (pybop.Interpolant method) (pybop.InverseOCV method) (pybop.OCPAverage method) (pybop.OCPCapacityToStoichiometry method) (pybop.OCPMerge method) (pybop.parameters.priors.BasePrior method) (pybop.plot.standard_plots.StandardPlot method) (pybop.plot.standard_plots.StandardSubplot method) (pybop.plot.StandardPlot method) (pybop.plot.StandardSubplot method) __getattr__() (pybop.MCMCSampler method) (pybop.Optimisation method) (pybop.optimisers.optimisation.Optimisation method) (pybop.samplers.mcmc_sampler.MCMCSampler method) __getitem__() (pybop._dataset.Dataset method) (pybop.Dataset method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method) __iter__() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) __len__() (pybop.models.base_model.TimeSeriesState method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.TimeSeriesState method) __next__() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) __repr__() (pybop._dataset.Dataset method) (pybop.BasePrior method) (pybop.Dataset method) (pybop.JointLogPrior method) (pybop.Parameter method) (pybop.Parameters method) (pybop.parameters.parameter.Parameter method) (pybop.parameters.parameter.Parameters method) (pybop.parameters.priors.BasePrior method) (pybop.parameters.priors.JointLogPrior method) __setattr__() (pybop.MCMCSampler method) (pybop.Optimisation method) (pybop.optimisers.optimisation.Optimisation method) (pybop.samplers.mcmc_sampler.MCMCSampler method) __setitem__() (pybop._dataset.Dataset method) (pybop.Dataset method) (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method) __str__() (pybop.OptimisationResult method) (pybop.optimisers._result.OptimisationResult method) __version__ (in module pybop) (in module pybop._version) _absolute_tolerance (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _add_sigma_parameters() (pybop.costs._likelihoods.GaussianLogLikelihood method) (pybop.GaussianLogLikelihood method) _add_single_sigma() (pybop.costs._likelihoods.GaussianLogLikelihood method) (pybop.GaussianLogLikelihood method) _alpha (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _append_transformation() (transformations.ComposedTransformation method) _ask_for_samples() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _autocorrelate_negative() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) _b1 (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _b1t (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _b2 (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _b2t (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _best_run (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _boundaries (pybop.BasePintsOptimiser attribute) (pybop.IRPropPlusImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _built (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins attribute) _built_initial_soc (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _built_model (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _calculate_sensitivities (pybop.BaseModel attribute) (pybop.models.base_model.BaseModel attribute) _calculate_statistics() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) _callback (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _chain_files (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _chains_in_memory (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _check_data_consistency() (pybop._dataset.Dataset method) (pybop.Dataset method) _check_frequency_constraints() (pybop._dataset.Dataset static method) (pybop.Dataset static method) _check_initial_phase() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _check_params() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.models.empirical.base_ecm.ECircuitModel method) (pybop.models.empirical.ECircuitModel method) (pybop.models.lithium_ion.base_echem.EChemBaseModel method) (pybop.models.lithium_ion.echem.GroupedSPM method) (pybop.models.lithium_ion.echem.GroupedSPMe method) (pybop.models.lithium_ion.echem.SPDiffusion method) (pybop.models.lithium_ion.echem.WeppnerHuggins method) (pybop.models.lithium_ion.EChemBaseModel method) (pybop.models.lithium_ion.GroupedSPM method) (pybop.models.lithium_ion.GroupedSPMe method) (pybop.models.lithium_ion.SPDiffusion method) (pybop.models.lithium_ion.WeppnerHuggins method) _check_stopping_criteria() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _check_time_constraints() (pybop._dataset.Dataset static method) (pybop.Dataset static method) _compute_far_point() (in module pybop.plot.voronoi) _cost0 (pybop.optimisers.scipy_optimisers.SciPyMinimize attribute) (pybop.SciPyMinimize attribute) _cov0 (pybop.BaseSampler attribute) (pybop.samplers.base_sampler.BaseSampler attribute) _create_evaluator() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _current (pybop.AdamWImpl attribute) (pybop.GradientDescentImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.SimulatedAnnealingImpl attribute) _current_df (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _current_f (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.SimulatedAnnealingImpl attribute) _dataset (pybop.BaseProblem attribute) (pybop.DesignProblem attribute) (pybop.FittingProblem attribute) (pybop.MultiFittingProblem attribute) (pybop.problems.base_problem.BaseProblem attribute) (pybop.problems.design_problem.DesignProblem attribute) (pybop.problems.fitting_problem.FittingProblem attribute) (pybop.problems.multi_fitting_problem.MultiFittingProblem attribute) _de (pybop.BaseCost attribute) (pybop.costs.base_cost.BaseCost attribute) _dim (pybop.CuckooSearchImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.RandomSearchImpl attribute) _disc (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _domain_data (pybop.DesignProblem attribute) (pybop.FittingProblem attribute) (pybop.MultiFittingProblem attribute) (pybop.problems.design_problem.DesignProblem attribute) (pybop.problems.fitting_problem.FittingProblem attribute) (pybop.problems.multi_fitting_problem.MultiFittingProblem attribute) _dsigma_scale (pybop.costs._likelihoods.GaussianLogLikelihood attribute), [1] (pybop.GaussianLogLikelihood attribute), [1] _electrode_soh (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _electrode_soh_half_cell (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _end_initial_phase() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _eps (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _error_measure() (pybop.costs.error_measures.MeanAbsoluteError method) (pybop.costs.error_measures.MeanSquaredError method) (pybop.costs.error_measures.Minkowski method) (pybop.costs.error_measures.RootMeanSquaredError method) (pybop.costs.error_measures.SumOfPower method) (pybop.costs.error_measures.SumSquaredError method) (pybop.costs.fitting_costs.FittingCost method) (pybop.FittingCost method) (pybop.MeanAbsoluteError method) (pybop.MeanSquaredError method) (pybop.Minkowski method) (pybop.RootMeanSquaredError method) (pybop.SumOfPower method) (pybop.SumSquaredError method) _eta (pybop.GradientDescentImpl attribute), [1] (pybop.optimisers._gradient_descent.GradientDescentImpl attribute), [1] _evaluate() (pybop._evaluation.SciPyEvaluator method) (pybop._evaluation.SequentialJaxEvaluator method) (pybop.FittingProblem method) (pybop.problems.fitting_problem.FittingProblem method) (pybop.SciPyEvaluator method) (pybop.SequentialJaxEvaluator method) _evaluation_files (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _evaluations (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _extend() (pybop.OptimisationResult method) (pybop.optimisers._result.OptimisationResult method) _extract_log_pdf() (pybop.ChainProcessor method) (pybop.MultiChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) (pybop.samplers.chain_processor.MultiChainProcessor method) (pybop.samplers.chain_processor.SingleChainProcessor method) (pybop.SingleChainProcessor method) _f_best (pybop.AdamWImpl attribute) (pybop.CuckooSearchImpl attribute) (pybop.GradientDescentImpl attribute), [1] (pybop.IRPropPlusImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.RandomSearchImpl attribute) (pybop.SimulatedAnnealingImpl attribute) _f_current (pybop.IRPropPlusImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) _final_cost (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _finalise_logging() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _fisher (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _fitness (pybop.CuckooSearchImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) _geometry (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _get_single_or_all() (pybop.OptimisationResult method) (pybop.optimisers._result.OptimisationResult method) _gradient_previous (pybop.IRPropPlusImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) _has_identical_problems (pybop.costs._weighted_cost.WeightedCost attribute) (pybop.WeightedCost attribute) _has_separable_problem (pybop.BaseCost attribute) (pybop.costs._weighted_cost.WeightedCost attribute) (pybop.costs.base_cost.BaseCost attribute) (pybop.costs.fitting_costs.ObserverCost attribute) (pybop.ObserverCost attribute) (pybop.WeightedCost attribute) _initial_phase (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _initial_phase_iterations (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _initialise_chain_processor() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _initialise_logging() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _initialise_storage() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _inverts_cost() (pybop.CostInterface method) (pybop.optimisers._cost_interface.CostInterface method) _is_elementwise (transformations.ComposedTransformation attribute) _is_region_outside_bounds() (in module pybop.plot.voronoi) _iter_count (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) _iter_transformations() (transformations.ComposedTransformation method) _iteration (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _iterations (pybop.BasePintsOptimiser attribute) (pybop.CuckooSearchImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) (pybop.SimulatedAnnealingImpl attribute) _json_path (pybop.parameters.parameter_set.ParameterSet attribute) (pybop.ParameterSet attribute) _lam (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _log_filename (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _log_likelihood (pybop.costs._likelihoods.BaseMetaLikelihood attribute) _log_pdf (pybop.BaseSampler attribute) (pybop.samplers.base_sampler.BaseSampler attribute)

_log_target_sum (jax_costs.JaxLogNormalLikelihood attribute) _log_to_screen (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _logpdfS1() (pybop.BasePrior method) (pybop.Exponential method) (pybop.Gaussian method) (pybop.JointLogPrior method) (pybop.parameters.priors.BasePrior method) (pybop.parameters.priors.Exponential method) (pybop.parameters.priors.Gaussian method) (pybop.parameters.priors.JointLogPrior method) (pybop.parameters.priors.Uniform method) (pybop.Uniform method) _logpi (pybop.costs._likelihoods.GaussianLogLikelihood attribute), [1] (pybop.GaussianLogLikelihood attribute), [1] _loop_iters (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _m (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _max_evaluations (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _max_iterations (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _mesh (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _message (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _model (pybop.BaseProblem attribute) (pybop.problems.base_problem.BaseProblem attribute) _model_with_set_params (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _multip (jax_costs.JaxGaussianLogLikelihoodKnownSigma attribute) (pybop.costs._likelihoods.GaussianLogLikelihoodKnownSigma attribute) (pybop.GaussianLogLikelihoodKnownSigma attribute) _n_chains (pybop.BaseSampler attribute) (pybop.samplers.base_sampler.BaseSampler attribute) _n_evaluations (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _n_iterations (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _n_parameters (pybop.Exponential attribute) (pybop.FittingProblem attribute) (pybop.Gaussian attribute) (pybop.JointLogPrior attribute) (pybop.parameters.priors.Exponential attribute) (pybop.parameters.priors.Gaussian attribute) (pybop.parameters.priors.JointLogPrior attribute) (pybop.parameters.priors.Uniform attribute) (pybop.problems.fitting_problem.FittingProblem attribute) (pybop.Uniform attribute) (transformations.ComposedTransformation attribute) (transformations.IdentityTransformation attribute) (transformations.LogTransformation attribute) (transformations.ScaledTransformation attribute) _n_workers (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _needs_sensitivities (pybop.BaseOptimiser attribute) (pybop.BasePintsOptimiser attribute) (pybop.BasePintsSampler attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _observer (pybop.costs.fitting_costs.ObserverCost attribute) (pybop.ObserverCost attribute) _offset (jax_costs.JaxGaussianLogLikelihoodKnownSigma attribute) (jax_costs.JaxLogNormalLikelihood attribute) (pybop.costs._likelihoods.GaussianLogLikelihoodKnownSigma attribute) (pybop.GaussianLogLikelihoodKnownSigma attribute) _pa (pybop.CuckooSearchImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) _pad_sigma0() (pybop.costs._likelihoods.GaussianLogLikelihood method) (pybop.GaussianLogLikelihood method) _parallel (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _parameter_sensitivities() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) _parameter_set (pybop.BaseModel attribute) (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.base_model.BaseModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _parameters (pybop.BaseCost attribute) (pybop.costs.base_cost.BaseCost attribute) _pints_optimiser (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _precompute() (jax_costs.JaxLogNormalLikelihood method) _print_verbose_output() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) _prior (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _priors (pybop.JointLogPrior attribute) (pybop.parameters.priors.JointLogPrior attribute) _process (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver attribute) (pybop.UnscentedKalmanFilterObserver attribute) _process_chains() (pybop.BasePintsSampler method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) _process_events() (pybop._utils.SymbolReplacer method) (pybop.SymbolReplacer method) _process_initial_conditions (pybop._utils.SymbolReplacer attribute) (pybop.SymbolReplacer attribute) _process_symbol() (pybop._utils.SymbolReplacer method) (pybop.SymbolReplacer method) _processed_symbols (pybop._utils.SymbolReplacer attribute) (pybop.SymbolReplacer attribute) _proposed (pybop.AdamWImpl attribute) (pybop.IRPropPlusImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.SimulatedAnnealingImpl attribute) _pybamm_solution (pybop.BaseModel attribute) (pybop.models.base_model.BaseModel attribute) (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _ready_for_tell (pybop.AdamWImpl attribute) (pybop.CuckooSearchImpl attribute) (pybop.GradientDescentImpl attribute), [1] (pybop.IRPropPlusImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.RandomSearchImpl attribute) (pybop.SimulatedAnnealingImpl attribute) _relative_tolerance (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _run() (pybop.BaseOptimiser method) (pybop.BasePintsOptimiser method) (pybop.BaseSciPyOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) (pybop.optimisers.scipy_optimisers.BaseSciPyOptimiser method) _run_optimiser() (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution method) (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.SciPyDifferentialEvolution method) (pybop.SciPyMinimize method) _running (pybop.AdamWImpl attribute) (pybop.CuckooSearchImpl attribute) (pybop.GradientDescentImpl attribute), [1] (pybop.IRPropPlusImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.RandomSearchImpl attribute) (pybop.SimulatedAnnealingImpl attribute) _sanitise_inputs() (pybop.BasePintsOptimiser method) (pybop.BaseSciPyOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) (pybop.optimisers.scipy_optimisers.BaseSciPyOptimiser method) _scipy_result (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _sensitivities (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _sensitivities_available (pybop.BaseModel attribute) (pybop.models.base_model.BaseModel attribute) _set_initial_state() (pybop.models.empirical.base_ecm.ECircuitModel method) (pybop.models.empirical.ECircuitModel method) (pybop.models.lithium_ion.base_echem.EChemBaseModel method) (pybop.models.lithium_ion.echem.GroupedSPM method) (pybop.models.lithium_ion.echem.GroupedSPMe method) (pybop.models.lithium_ion.echem.SPDiffusion method) (pybop.models.lithium_ion.EChemBaseModel method) (pybop.models.lithium_ion.GroupedSPM method) (pybop.models.lithium_ion.GroupedSPMe method) (pybop.models.lithium_ion.SPDiffusion method) _set_up_optimiser() (pybop.BaseOptimiser method) (pybop.BasePintsOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution method) (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.SciPyDifferentialEvolution method) (pybop.SciPyMinimize method) _sigma0 (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver attribute) (pybop.UnscentedKalmanFilterObserver attribute) _single_chain (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _solver (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) _sort_region_vertices() (in module pybop.plot.voronoi) _spatial_methods (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _state (pybop.Observer attribute) (pybop.observers.observer.Observer attribute) _step_sizes (pybop.IRPropPlusImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) _submesh_types (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _suggested_population_size() (pybop.CuckooSearchImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.RandomSearchImpl method) _summary_variables (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins attribute) _symbol_replacement_map (pybop._utils.SymbolReplacer attribute) (pybop.SymbolReplacer attribute) _target (pybop.BaseProblem attribute) (pybop.DesignProblem attribute) (pybop.problems.base_problem.BaseProblem attribute) (pybop.problems.design_problem.DesignProblem attribute) _target_as_array (jax_costs.JaxLogNormalLikelihood attribute) _temperature (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.SimulatedAnnealingImpl attribute) _temperature_decay (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.SimulatedAnnealingImpl attribute) _threshold (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _time (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _to_list() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) _transform() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) _transformation (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _transformations (transformations.ComposedTransformation attribute) _ukf (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver attribute) (pybop.UnscentedKalmanFilterObserver attribute) _unchanged_max_iterations (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _unprocessed_model (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _unprocessed_parameter_set (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _update_log_entry() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) _update_previous (pybop.IRPropPlusImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) _update_solver_sensitivities() (jax_costs.BaseJaxCost method) _use_f_guessed (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) _v (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) _var_pts (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) _verbose (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _voronoi_regions() (in module pybop.plot.voronoi) _warm_up (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) _x (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) _x0 (pybop.BaseSampler attribute) (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) (pybop.samplers.base_sampler.BaseSampler attribute) _x_best (pybop.AdamWImpl attribute) (pybop.CuckooSearchImpl attribute) (pybop.GradientDescentImpl attribute) (pybop.IRPropPlusImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) (pybop.optimisers._gradient_descent.GradientDescentImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute) (pybop.optimisers._random_search.RandomSearchImpl attribute) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl attribute) (pybop.RandomSearchImpl attribute) (pybop.SimulatedAnnealingImpl attribute) _x_current (pybop.IRPropPlusImpl attribute) (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute)

A

abandon_nests() (pybop.CuckooSearchImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) active (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) AdamW (class in pybop) (class in pybop.optimisers.pints_optimisers) AdamWImpl (class in pybop) (class in pybop.optimisers._adamw) AdaptiveCovarianceMCMC (class in pybop) (class in pybop.samplers.pints_samplers) add() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) add_result() (pybop.OptimisationResult method) (pybop.optimisers._result.OptimisationResult method) add_spaces() (in module pybop._utils) add_traces() (pybop.plot.standard_plots.StandardPlot method) (pybop.plot.StandardPlot method) additional_variables (pybop.BaseProblem attribute) (pybop.DesignProblem attribute) (pybop.problems.base_problem.BaseProblem attribute) (pybop.problems.design_problem.DesignProblem attribute) all_samples (pybop.PosteriorSummary attribute) (pybop.samplers.mcmc_summary.PosteriorSummary attribute) allow_infeasible_solutions (pybop.BaseModel attribute) (pybop.BaseOptimiser attribute) (pybop.models.base_model.BaseModel attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) allow_stretching (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.OCPAverage attribute) alpha (pybop.observers.unscented_kalman.SquareRootUKF attribute) append() (transformations.ComposedTransformation method) applied_prior_bounds (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) apply_parameter_grouping() (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion static method) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM static method) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe static method) (pybop.models.lithium_ion.echem.GroupedSPM method) (pybop.models.lithium_ion.echem.GroupedSPMe method) (pybop.models.lithium_ion.echem.SPDiffusion method) (pybop.models.lithium_ion.echem.WeppnerHuggins method) (pybop.models.lithium_ion.GroupedSPM method) (pybop.models.lithium_ion.GroupedSPMe method) (pybop.models.lithium_ion.SPDiffusion method) (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins static method) (pybop.models.lithium_ion.WeppnerHuggins method)

approximate_capacity() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.models.lithium_ion.base_echem.EChemBaseModel method) (pybop.models.lithium_ion.EChemBaseModel method) as_dict() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) as_ndarray() (pybop.models.base_model.TimeSeriesState method) (pybop.TimeSeriesState method) ask() (pybop.AdamWImpl method) (pybop.CuckooSearchImpl method) (pybop.GradientDescentImpl method) (pybop.IRPropPlusImpl method) (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.RandomSearchImpl method) (pybop.SimulatedAnnealingImpl method) assign_nearest_value() (in module pybop.plot.voronoi) autocorrelation() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) average_iterations() (pybop.OptimisationResult method) (pybop.optimisers._result.OptimisationResult method) axis_titles (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute)

B

b1 (pybop.AdamWImpl property) (pybop.optimisers._adamw.AdamWImpl property) b2 (pybop.AdamWImpl property) (pybop.optimisers._adamw.AdamWImpl property) base_transformation module BaseApplication (class in pybop) (class in pybop.applications.base_method) BaseCost (class in pybop) (class in pybop.costs.base_cost) BaseCost.DeferredPrediction (class in pybop) (class in pybop.costs.base_cost) BaseGroupedSPM (class in pybop.models.lithium_ion.basic_SPM) BaseGroupedSPMe (class in pybop.models.lithium_ion.basic_SPMe) BaseJaxCost (class in jax_costs) BaseLikelihood (class in pybop) (class in pybop.costs._likelihoods) BaseMetaLikelihood (class in pybop.costs._likelihoods) BaseModel (class in pybop) (class in pybop.models.base_model) BaseOptimiser (class in pybop) (class in pybop.optimisers.base_optimiser) BasePintsOptimiser (class in pybop) (class in pybop.optimisers.base_pints_optimiser) BasePintsSampler (class in pybop) (class in pybop.samplers.base_pints_sampler) BasePrior (class in pybop) (class in pybop.parameters.priors)

BaseProblem (class in pybop) (class in pybop.problems.base_problem) BaseSampler (class in pybop) (class in pybop.samplers.base_sampler) BaseSciPyOptimiser (class in pybop) (class in pybop.optimisers.scipy_optimisers) BaseSPDiffusion (class in pybop.models.lithium_ion.basic_SP_diffusion) BaseWeppnerHuggins (class in pybop.models.lithium_ion.weppner_huggins) beta (pybop.CuckooSearchImpl attribute) (pybop.observers.unscented_kalman.SquareRootUKF attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) bool_mask (pybop.observers.unscented_kalman.SquareRootUKF attribute) boundaries (pybop.AdamWImpl attribute) (pybop.optimisers._adamw.AdamWImpl attribute) bounds (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) build() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) build_model() (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion method) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM method) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe method) built_initial_soc (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) built_model (pybop.BaseModel property) (pybop.models.base_model.BaseModel property)

C

calculate_impedance() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) calculate_sensitivities (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) call_cost() (pybop.CostInterface method) (pybop.optimisers._cost_interface.CostInterface method) cdf() (pybop.BasePrior method) (pybop.parameters.priors.BasePrior method) cell_mass() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.models.lithium_ion.base_echem.EChemBaseModel method) (pybop.models.lithium_ion.EChemBaseModel method) cell_volume() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.models.lithium_ion.base_echem.EChemBaseModel method) (pybop.models.lithium_ion.EChemBaseModel method) ChainProcessor (class in pybop) (class in pybop.samplers.chain_processor) chains (pybop.PosteriorSummary attribute) (pybop.samplers.mcmc_summary.PosteriorSummary attribute) chains_in_memory (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) check() (pybop._dataset.Dataset method) (pybop.Dataset method) check_browser_availability() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) check_for_finite_cost() (pybop.OptimisationResult method) (pybop.optimisers._result.OptimisationResult method) check_model (pybop.BaseProblem attribute) (pybop.problems.base_problem.BaseProblem attribute) check_monotonicity() (pybop.applications.base_method.BaseApplication method) (pybop.BaseApplication method) check_params() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) check_physical_viability() (pybop.OptimisationResult method) (pybop.optimisers._result.OptimisationResult method) check_renderer_settings() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) check_sensitivities_available() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) check_sigma0() (jax_costs.BaseJaxCost static method) (pybop.costs._likelihoods.GaussianLogLikelihoodKnownSigma method) (pybop.GaussianLogLikelihoodKnownSigma method) chemistry (pybop.parameters.parameter_set.ParameterSet attribute) (pybop.ParameterSet attribute) cholupdate() (pybop.observers.unscented_kalman.SquareRootUKF static method) classify_parameters() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) classify_using_hessian() (in module pybop) (in module pybop._classification) clear() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) clip_candidates() (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.RandomSearchImpl method) clip_nests() (pybop.CuckooSearchImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) CMAES (class in pybop) (class in pybop.optimisers.pints_optimisers) coeff (transformations.UnitHyperCube attribute), [1] coefficient (transformations.ScaledTransformation attribute) ComposedTransformation (class in transformations) compute() (pybop.BaseCost method) (pybop.costs._likelihoods.GaussianLogLikelihood method) (pybop.costs._likelihoods.GaussianLogLikelihoodKnownSigma method) (pybop.costs._likelihoods.LogPosterior method) (pybop.costs._likelihoods.ScaledLogLikelihood method) (pybop.costs._weighted_cost.WeightedCost method) (pybop.costs.base_cost.BaseCost method) (pybop.costs.design_costs.GravimetricEnergyDensity method) (pybop.costs.design_costs.GravimetricPowerDensity method) (pybop.costs.design_costs.VolumetricEnergyDensity method) (pybop.costs.design_costs.VolumetricPowerDensity method) (pybop.costs.fitting_costs.FittingCost method) (pybop.costs.fitting_costs.ObserverCost method) (pybop.FittingCost method) (pybop.GaussianLogLikelihood method) (pybop.GaussianLogLikelihoodKnownSigma method) (pybop.GravimetricEnergyDensity method) (pybop.GravimetricPowerDensity method) (pybop.LogPosterior method) (pybop.ObserverCost method) (pybop.ScaledLogLikelihood method) (pybop.VolumetricEnergyDensity method) (pybop.VolumetricPowerDensity method) (pybop.WeightedCost method)

construct_transformation() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) contour() (in module pybop.plot) (in module pybop.plot.contour) convergence() (in module pybop.plot) (in module pybop.plot.convergence) convert_covariance_matrix() (base_transformation.Transformation method) convert_standard_deviation() (base_transformation.Transformation method) convert_to_pybamm_initial_state() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) cooling_rate (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl property) (pybop.SimulatedAnnealingImpl property) copy() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method) cost (pybop.applications.gitt_methods.GITTFit attribute) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.GITTFit attribute) (pybop.GITTPulseFit attribute) (pybop.OCPAverage attribute) (pybop.OCPCapacityToStoichiometry attribute) (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) (pybop.optimisers.base_optimiser.OptimisationLog attribute) cost_best (pybop.optimisers.base_optimiser.OptimisationLog attribute) cost_wrapper() (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.SciPyMinimize method) CostInterface (class in pybop) (class in pybop.optimisers._cost_interface) costs (pybop.costs._weighted_cost.WeightedCost attribute) (pybop.WeightedCost attribute) Covariance (pybop.Observer attribute) (pybop.observers.observer.Observer attribute) (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver attribute) (pybop.UnscentedKalmanFilterObserver attribute) create_trace() (pybop.plot.standard_plots.StandardPlot method) (pybop.plot.StandardPlot method) CuckooSearch (class in pybop) (class in pybop.optimisers.pints_optimisers) CuckooSearchImpl (class in pybop) (class in pybop.optimisers._cuckoo) current_value() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method)

D

data (pybop._dataset.Dataset attribute) (pybop.Dataset attribute) Dataset (class in pybop) (class in pybop._dataset) dataset (pybop.BaseProblem property) (pybop.problems.base_problem.BaseProblem property) dataset() (in module pybop.plot) (in module pybop.plot.dataset) default_geometry (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion property) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM property) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe property) (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins property) DEFAULT_LAYOUT_OPTIONS (in module pybop.plot.standard_plots) default_max_iterations (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) default_parameter_values (pybop.ExponentialDecayModel attribute), [1] (pybop.models._exponential_decay.ExponentialDecayModel attribute), [1] (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion property) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM property) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe property) (pybop.models.lithium_ion.EChemBaseModel attribute) (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins property) default_quick_plot_variables (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion property) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM property) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe property) default_solver (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins property) default_spatial_methods (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion property) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM property) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe property) (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins property) default_submesh_types (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion property) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM property) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe property) (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins property)

DEFAULT_SUBPLOT_OPTIONS (in module pybop.plot.standard_plots) DEFAULT_SUBPLOT_TRACE_OPTIONS (in module pybop.plot.standard_plots) DEFAULT_TRACE_OPTIONS (in module pybop.plot.standard_plots) default_var_pts (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion property) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM property) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe property) (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins property) DesignCost (class in pybop) (class in pybop.costs.design_costs) DesignProblem (class in pybop) (class in pybop.problems.design_problem) DFN (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) DifferentialEvolutionMCMC (class in pybop) (class in pybop.samplers.pints_samplers) disc (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) domain (pybop._dataset.Dataset attribute) (pybop.BaseProblem attribute) (pybop.Dataset attribute) (pybop.MultiFittingProblem attribute) (pybop.problems.base_problem.BaseProblem attribute) (pybop.problems.multi_fitting_problem.MultiFittingProblem attribute) domain_data (pybop.BaseProblem property) (pybop.problems.base_problem.BaseProblem property) DramACMC (class in pybop) (class in pybop.samplers.pints_samplers) DREAM (class in pybop) (class in pybop.samplers.pints_samplers) dsigma_scale (pybop.costs._likelihoods.GaussianLogLikelihood property) (pybop.GaussianLogLikelihood property) dy (pybop.BaseCost attribute) (pybop.costs.base_cost.BaseCost attribute)

E

EChemBaseModel (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.base_echem) ECircuitModel (class in pybop.models.empirical) (class in pybop.models.empirical.base_ecm) effective_sample_size() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) eis (pybop.BaseModel attribute) (pybop.BaseProblem attribute) (pybop.models.base_model.BaseModel attribute) (pybop.problems.base_problem.BaseProblem attribute) electrode (pybop.applications.gitt_methods.GITTFit attribute) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.GITTFit attribute) (pybop.GITTPulseFit attribute) EmceeHammerMCMC (class in pybop) (class in pybop.samplers.pints_samplers) ensure_plotly_installed() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) error_message (in module pybop) error_out (pybop.FittingProblem attribute) (pybop.problems.fitting_problem.FittingProblem attribute) error_sense (pybop.FittingProblem attribute) (pybop.problems.fitting_problem.FittingProblem attribute) eta_max (pybop.IRPropPlusImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute), [1] eta_min (pybop.IRPropPlusImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute), [1] evaluate() (jax_costs.JaxGaussianLogLikelihoodKnownSigma method) (jax_costs.JaxLogNormalLikelihood method) (jax_costs.JaxSumSquaredError method), [1] (pybop.BaseProblem method) (pybop.DesignProblem method) (pybop.FittingProblem method) (pybop.MultiFittingProblem method) (pybop.Observer method) (pybop.observers.observer.Observer method) (pybop.problems.base_problem.BaseProblem method) (pybop.problems.design_problem.DesignProblem method) (pybop.problems.fitting_problem.FittingProblem method) (pybop.problems.multi_fitting_problem.MultiFittingProblem method)

evaluate_symbol() (pybop.parameters.parameter_set.ParameterSet static method) (pybop.ParameterSet static method) evaluateS1() (pybop.BaseProblem method) (pybop.FittingProblem method) (pybop.MultiFittingProblem method) (pybop.problems.base_problem.BaseProblem method) (pybop.problems.fitting_problem.FittingProblem method) (pybop.problems.multi_fitting_problem.MultiFittingProblem method) evaluations (pybop.optimisers.base_optimiser.OptimisationLog attribute) exception (pybop.BaseProblem attribute) (pybop.problems.base_problem.BaseProblem attribute) Experiment (class in pybop) (class in pybop._experiment) experiment (pybop.DesignProblem attribute) (pybop.problems.design_problem.DesignProblem attribute) Exponential (class in pybop) (class in pybop.parameters.priors) ExponentialDecayModel (class in pybop) (class in pybop.models._exponential_decay) export_parameters() (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method)

F

f (pybop.observers.unscented_kalman.SquareRootUKF attribute) f_best() (pybop.AdamWImpl method) (pybop.CuckooSearchImpl method) (pybop.GradientDescentImpl method) (pybop.IRPropPlusImpl method) (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.RandomSearchImpl method) (pybop.SimulatedAnnealingImpl method) f_guessed() (pybop.AdamWImpl method) (pybop.optimisers._adamw.AdamWImpl method) f_guessed_tracking() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) failure_output (pybop.BaseProblem attribute) (pybop.problems.base_problem.BaseProblem attribute)

filtered_cholupdate() (pybop.observers.unscented_kalman.SquareRootUKF static method) final_cost (pybop.OptimisationResult attribute) (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult property) final_cost_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) fisher (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) fisher_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) FittingCost (class in pybop) (class in pybop.costs.fitting_costs) FittingProblem (class in pybop) (class in pybop.problems.fitting_problem) FLOAT_FORMAT (in module pybop) formation_concentrations (pybop.parameters.parameter_set.ParameterSet attribute) (pybop.ParameterSet attribute)

G

Gaussian (class in pybop) (class in pybop.parameters.priors) GaussianLogLikelihood (class in pybop) (class in pybop.costs._likelihoods) GaussianLogLikelihoodKnownSigma (class in pybop) (class in pybop.costs._likelihoods) gen_sigma_points() (pybop.observers.unscented_kalman.SquareRootUKF static method) geometric_parameters (pybop.ExponentialDecayModel attribute) (pybop.models._exponential_decay.ExponentialDecayModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) geometry (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) get_bounds() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) get_bounds_for_plotly() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) get_current_covariance() (pybop.Observer method) (pybop.observers.observer.Observer method) (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver method) (pybop.UnscentedKalmanFilterObserver method) get_current_measure() (pybop.Observer method) (pybop.observers.observer.Observer method) get_current_state() (pybop.Observer method) (pybop.observers.observer.Observer method) get_current_time() (pybop.Observer method) (pybop.observers.observer.Observer method) get_evaluation_metrics() (pybop.ChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) get_initial_state() (pybop.models.empirical.base_ecm.ECircuitModel method) (pybop.models.empirical.ECircuitModel method) get_initial_value() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) get_measure() (pybop.Observer method) (pybop.observers.observer.Observer method) get_parameter_info() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method)

get_sigma0() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) get_state() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) get_subset() (pybop._dataset.Dataset method) (pybop.Dataset method) get_summary_statistics() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) get_target() (pybop.BaseProblem method) (pybop.problems.base_problem.BaseProblem method) get_transformations() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) gitt_dataset (pybop.applications.gitt_methods.GITTFit attribute) (pybop.GITTFit attribute) gitt_pulse (pybop.applications.gitt_methods.GITTFit attribute) (pybop.GITTFit attribute) GITTFit (class in pybop) (class in pybop.applications.gitt_methods) GITTPulseFit (class in pybop) (class in pybop.applications.gitt_methods) go (pybop.plot.plotly_manager.PlotlyManager attribute), [1] (pybop.plot.PlotlyManager attribute), [1] (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) (pybop.PosteriorSummary attribute) (pybop.samplers.mcmc_summary.PosteriorSummary attribute) gradient_step (pybop.costs._likelihoods.LogPosterior attribute) (pybop.LogPosterior attribute) GradientDescent (class in pybop) (class in pybop.optimisers.pints_optimisers) GradientDescentImpl (class in pybop) (class in pybop.optimisers._gradient_descent) GravimetricEnergyDensity (class in pybop) (class in pybop.costs.design_costs) GravimetricPowerDensity (class in pybop) (class in pybop.costs.design_costs) GroupedSPM (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) GroupedSPMe (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem)

H

h (pybop.observers.unscented_kalman.SquareRootUKF attribute) HaarioACMC (class in pybop) (class in pybop.samplers.pints_samplers) HaarioBardenetACMC (class in pybop) (class in pybop.samplers.pints_samplers) HamiltonianMCMC (class in pybop) (class in pybop.samplers.pints_samplers)

has_identical_problems (pybop.costs._weighted_cost.WeightedCost property) (pybop.WeightedCost property) has_separable_problem (pybop.BaseCost property) (pybop.costs._likelihoods.BaseMetaLikelihood property) (pybop.costs.base_cost.BaseCost property) hypot() (pybop.observers.unscented_kalman.SquareRootUKF method)

I

icdf() (pybop.BasePrior method) (pybop.parameters.priors.BasePrior method) IdentityTransformation (class in transformations) import_parameters() (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method) initial_value (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) initial_value() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) initialise_eis_simulation() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) Inputs (in module pybop) (in module pybop.parameters.parameter) inputs (pybop.models.base_model.TimeSeriesState attribute) (pybop.TimeSeriesState attribute) install_plotly() (pybop.plot.plotly_manager.PlotlyManager static method) (pybop.plot.PlotlyManager static method) inter (transformations.UnitHyperCube attribute), [1] intercept (transformations.ScaledTransformation attribute) interp1d (pybop.applications.base_method.Interpolant attribute) (pybop.Interpolant attribute) Interpolant (class in pybop) (class in pybop.applications.base_method) interpolate_point() (in module pybop.plot.voronoi)

inverse_coeff (transformations.ScaledTransformation attribute) InverseOCV (class in pybop) (class in pybop.applications.base_method) invert_cost (pybop.CostInterface attribute) (pybop.optimisers._cost_interface.CostInterface attribute) IRPropMin (class in pybop) (class in pybop.optimisers.pints_optimisers) IRPropPlus (class in pybop) (class in pybop.optimisers.pints_optimisers) IRPropPlusImpl (class in pybop) (class in pybop.optimisers._irprop_plus) is_elementwise() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) is_json_serializable() (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method) is_numeric() (in module pybop) (in module pybop._utils) iter_time (pybop.BasePintsSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) iteration (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) iterations (pybop.optimisers.base_optimiser.OptimisationLog attribute)

J

jacobian() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) jacobian_S1() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) jax_costs module

JaxGaussianLogLikelihoodKnownSigma (class in jax_costs) jaxify_solver() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) JaxLogNormalLikelihood (class in jax_costs) JaxSumSquaredError (class in jax_costs) join() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) join_parameters() (pybop.BaseCost method) (pybop.costs.base_cost.BaseCost method) JointLogPrior (class in pybop) (class in pybop.parameters.priors)

K

key_mapping (pybop.BaseSciPyOptimiser attribute) (pybop.optimisers.scipy_optimisers.BaseSciPyOptimiser attribute) keys() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method)

L

lam (pybop.AdamWImpl property) (pybop.optimisers._adamw.AdamWImpl property) layout (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) learning_rate() (pybop.GradientDescentImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) levy_flight() (pybop.CuckooSearchImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) likelihood (pybop.costs._likelihoods.BaseMetaLikelihood property) loc (pybop.BasePrior attribute) (pybop.Exponential attribute) (pybop.Gaussian attribute) (pybop.parameters.priors.BasePrior attribute) (pybop.parameters.priors.Exponential attribute) (pybop.parameters.priors.Gaussian attribute) (pybop.parameters.priors.Uniform attribute) (pybop.Uniform attribute) log (pybop.BaseOptimiser attribute), [1] (pybop.optimisers.base_optimiser.BaseOptimiser attribute), [1] log_jacobian_det() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method)

log_jacobian_det_S1() (base_transformation.Transformation method) (transformations.ComposedTransformation method) (transformations.IdentityTransformation method) (transformations.LogTransformation method) (transformations.ScaledTransformation method) log_likelihood() (pybop.Observer method) (pybop.observers.observer.Observer method) log_update() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) logpdf() (pybop.BasePrior method) (pybop.JointLogPrior method) (pybop.parameters.priors.BasePrior method) (pybop.parameters.priors.JointLogPrior method) logpdfS1() (pybop.BasePrior method) (pybop.parameters.priors.BasePrior method) LogPosterior (class in pybop) (class in pybop.costs._likelihoods) LogTransformation (class in transformations) lower (pybop.parameters.priors.Uniform attribute) (pybop.Uniform attribute) (transformations.UnitHyperCube attribute), [1] lower_bound (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute)

M

make_subplots (pybop.plot.plotly_manager.PlotlyManager attribute), [1] (pybop.plot.PlotlyManager attribute), [1] (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) MALAMCMC (class in pybop) (class in pybop.samplers.pints_samplers) margin (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) max_iterations (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) MCMCSampler (class in pybop) (class in pybop.samplers.mcmc_sampler) mean (pybop.BasePrior property) (pybop.parameters.priors.BasePrior property) (pybop.parameters.priors.Uniform property) (pybop.Uniform property) MeanAbsoluteError (class in pybop) (class in pybop.costs.error_measures) MeanSquaredError (class in pybop) (class in pybop.costs.error_measures) mesh (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) message (pybop.OptimisationResult attribute) (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult property) message_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) MetropolisRandomWalkMCMC (class in pybop) (class in pybop.samplers.pints_samplers) minimising (pybop.BaseCost attribute) (pybop.BaseLikelihood attribute) (pybop.costs._likelihoods.BaseLikelihood attribute) (pybop.costs.base_cost.BaseCost attribute) (pybop.costs.design_costs.DesignCost attribute) (pybop.DesignCost attribute) (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) Minkowski (class in pybop) (class in pybop.costs.error_measures) model (jax_costs.BaseJaxCost attribute), [1] (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.BaseProblem property) (pybop.GITTPulseFit attribute) (pybop.problems.base_problem.BaseProblem property) model_with_set_params (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) module base_transformation jax_costs pybop pybop._classification pybop._dataset pybop._evaluation pybop._experiment pybop._utils pybop._version pybop.applications pybop.applications.base_method pybop.applications.gitt_methods pybop.applications.ocp_methods pybop.costs pybop.costs._likelihoods pybop.costs._weighted_cost pybop.costs.base_cost pybop.costs.design_costs pybop.costs.error_measures pybop.costs.fitting_costs pybop.models pybop.models._exponential_decay pybop.models.base_model pybop.models.empirical pybop.models.empirical.base_ecm pybop.models.empirical.ecm pybop.models.lithium_ion pybop.models.lithium_ion.base_echem pybop.models.lithium_ion.basic_SP_diffusion pybop.models.lithium_ion.basic_SPM pybop.models.lithium_ion.basic_SPMe pybop.models.lithium_ion.echem pybop.models.lithium_ion.weppner_huggins pybop.observers pybop.observers.observer pybop.observers.unscented_kalman pybop.optimisers pybop.optimisers._adamw pybop.optimisers._cost_interface pybop.optimisers._cuckoo pybop.optimisers._gradient_descent pybop.optimisers._irprop_plus pybop.optimisers._random_search pybop.optimisers._result pybop.optimisers._simulated_annealing pybop.optimisers.base_optimiser pybop.optimisers.base_pints_optimiser pybop.optimisers.optimisation pybop.optimisers.pints_optimisers pybop.optimisers.scipy_optimisers pybop.parameters pybop.parameters.parameter pybop.parameters.parameter_set pybop.parameters.priors pybop.plot pybop.plot.contour pybop.plot.convergence pybop.plot.dataset pybop.plot.nyquist pybop.plot.parameters pybop.plot.plotly_manager pybop.plot.problem pybop.plot.standard_plots pybop.plot.voronoi pybop.problems pybop.problems.base_problem pybop.problems.design_problem pybop.problems.fitting_problem pybop.problems.multi_fitting_problem pybop.samplers pybop.samplers.base_pints_sampler pybop.samplers.base_sampler pybop.samplers.chain_processor pybop.samplers.mcmc_sampler pybop.samplers.mcmc_summary pybop.samplers.pints_samplers transformations

MonomialGammaHamiltonianMCMC (class in pybop) (class in pybop.samplers.pints_samplers) MPM (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) MSMR (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) MultiChainProcessor (class in pybop) (class in pybop.samplers.chain_processor) MultiFittingProblem (class in pybop) (class in pybop.problems.multi_fitting_problem)

N

n_data (jax_costs.BaseJaxCost attribute), [1] (pybop.BaseLikelihood attribute) (pybop.costs._likelihoods.BaseLikelihood attribute) (pybop.FittingProblem attribute) (pybop.problems.fitting_problem.FittingProblem attribute) n_domain_data (pybop.MultiFittingProblem attribute) (pybop.problems.multi_fitting_problem.MultiFittingProblem attribute) n_evaluations (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) n_evaluations_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) n_hyper_parameters() (pybop.AdamWImpl method) (pybop.GradientDescentImpl method) (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.SimulatedAnnealingImpl method) n_iterations (pybop.OptimisationResult attribute) (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult property) n_iterations_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) n_outputs (pybop.BaseProblem property) (pybop.problems.base_problem.BaseProblem property) n_parameters (base_transformation.Transformation property) (pybop.BaseCost property) (pybop.BaseProblem property) (pybop.costs._likelihoods.BaseMetaLikelihood property) (pybop.costs.base_cost.BaseCost property) (pybop.problems.base_problem.BaseProblem property) n_runs (pybop.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult attribute) n_samples (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) n_states (pybop.ExponentialDecayModel attribute), [1] (pybop.models._exponential_decay.ExponentialDecayModel attribute), [1] n_sto_points (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPMerge attribute) (pybop.OCPAverage attribute) (pybop.OCPMerge attribute) name (pybop.applications.base_method.Interpolant attribute) (pybop.BaseCost property) (pybop.BaseModel attribute) (pybop.costs.base_cost.BaseCost property) (pybop.Exponential attribute) (pybop.Gaussian attribute) (pybop.Interpolant attribute) (pybop.models.base_model.BaseModel attribute) (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) (pybop.parameters.priors.Exponential attribute) (pybop.parameters.priors.Gaussian attribute) (pybop.parameters.priors.Uniform attribute) (pybop.Uniform attribute)

name() (pybop.AdamWImpl method) (pybop.BaseOptimiser method) (pybop.BasePintsOptimiser method) (pybop.CuckooSearchImpl method) (pybop.GradientDescentImpl method) (pybop.IRPropPlusImpl method) (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) (pybop.optimisers.scipy_optimisers.SciPyDifferentialEvolution method) (pybop.optimisers.scipy_optimisers.SciPyMinimize method) (pybop.RandomSearchImpl method) (pybop.SciPyDifferentialEvolution method) (pybop.SciPyMinimize method) (pybop.SimulatedAnnealingImpl method) needs_sensitivities (pybop.BaseOptimiser property) (pybop.BasePintsSampler property) (pybop.optimisers.base_optimiser.BaseOptimiser property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) needs_sensitivities() (pybop.AdamWImpl method) (pybop.GradientDescentImpl method) (pybop.IRPropPlusImpl method) (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.SimulatedAnnealingImpl method) NelderMead (class in pybop) (class in pybop.optimisers.pints_optimisers) new_copy() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) num_cols (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) num_parameters (pybop.PosteriorSummary attribute) (pybop.samplers.mcmc_summary.PosteriorSummary attribute) num_resamples (pybop.BaseSciPyOptimiser attribute) (pybop.optimisers.scipy_optimisers.BaseSciPyOptimiser attribute) num_rows (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) num_traces (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) NUTS (class in pybop) (class in pybop.samplers.pints_samplers) nyquist() (in module pybop.plot) (in module pybop.plot.nyquist)

O

observe() (pybop.Observer method) (pybop.observers.observer.Observer method) (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver method) (pybop.UnscentedKalmanFilterObserver method) observed_fisher() (pybop.BaseLikelihood method) (pybop.costs._likelihoods.BaseLikelihood method) Observer (class in pybop) (class in pybop.observers.observer) ObserverCost (class in pybop) (class in pybop.costs.fitting_costs) ocp_charge (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPMerge attribute) (pybop.OCPAverage attribute) (pybop.OCPMerge attribute) ocp_discharge (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPMerge attribute) (pybop.OCPAverage attribute) (pybop.OCPMerge attribute) OCPAverage (class in pybop) (class in pybop.applications.ocp_methods) OCPCapacityToStoichiometry (class in pybop) (class in pybop.applications.ocp_methods) OCPMerge (class in pybop) (class in pybop.applications.ocp_methods) ocv_dataset (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.OCPCapacityToStoichiometry attribute)

ocv_function (pybop.applications.base_method.InverseOCV attribute) (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.InverseOCV attribute) (pybop.OCPCapacityToStoichiometry attribute) optim (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.GITTPulseFit attribute) (pybop.OptimisationResult attribute), [1] (pybop.optimisers._result.OptimisationResult attribute), [1] Optimisation (class in pybop) (class in pybop.optimisers.optimisation) OptimisationLog (class in pybop.optimisers.base_optimiser) OptimisationResult (class in pybop) (class in pybop.optimisers._result) optimiser (pybop.applications.base_method.InverseOCV attribute) (pybop.applications.gitt_methods.GITTFit attribute) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.GITTFit attribute) (pybop.GITTPulseFit attribute) (pybop.InverseOCV attribute) (pybop.OCPAverage attribute) (pybop.OCPCapacityToStoichiometry attribute) option_methods (pybop.BasePintsOptimiser attribute) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser attribute) output_variables (pybop.BaseProblem property) (pybop.problems.base_problem.BaseProblem property)

P

p (pybop.costs.error_measures.Minkowski attribute) (pybop.costs.error_measures.SumOfPower attribute) (pybop.Minkowski attribute) (pybop.SumOfPower attribute) pa (pybop.CuckooSearchImpl property) (pybop.optimisers._cuckoo.CuckooSearchImpl property) param (pybop.Parameters attribute) (pybop.parameters.parameter.Parameters attribute) param_check_counter (pybop.BaseModel attribute) (pybop.models.base_model.BaseModel attribute) param_checker (pybop.BaseModel attribute) (pybop.models.base_model.BaseModel attribute) Parameter (class in pybop) (class in pybop.parameters.parameter) parameter_set (pybop.applications.gitt_methods.GITTFit attribute) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.BaseModel property) (pybop.GITTFit attribute) (pybop.GITTPulseFit attribute) (pybop.models.base_model.BaseModel property) parameter_values (pybop.parameters.parameter_set.ParameterSet attribute) (pybop.ParameterSet attribute) Parameters (class in pybop) (class in pybop.parameters.parameter) parameters (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.BaseCost property) (pybop.BaseModel attribute) (pybop.BaseOptimiser attribute) (pybop.BaseProblem attribute) (pybop.costs._likelihoods.BaseMetaLikelihood property) (pybop.costs.base_cost.BaseCost property) (pybop.GITTPulseFit attribute) (pybop.models.base_model.BaseModel attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.problems.base_problem.BaseProblem attribute) parameters() (in module pybop.plot) (in module pybop.plot.parameters) ParameterSet (class in pybop) (class in pybop.parameters.parameter_set) parse_data() (pybop.plot.standard_plots.StandardPlot method) (pybop.plot.StandardPlot method) pdf() (pybop.BasePrior method) (pybop.parameters.priors.BasePrior method) physical_viability (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) pio (pybop.plot.plotly_manager.PlotlyManager attribute), [1] (pybop.plot.PlotlyManager attribute), [1] plot_chains() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) plot_posterior() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) plot_trace() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) PlotlyManager (class in pybop.plot) (class in pybop.plot.plotly_manager) PopulationMCMC (class in pybop) (class in pybop.samplers.pints_samplers) post_install_setup() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) PosteriorSummary (class in pybop) (class in pybop.samplers.mcmc_summary) predict() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) prior (pybop.BasePintsSampler property) (pybop.BasePrior attribute) (pybop.costs._likelihoods.LogPosterior property) (pybop.Exponential attribute) (pybop.Gaussian attribute) (pybop.LogPosterior property) (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) (pybop.parameters.priors.BasePrior attribute) (pybop.parameters.priors.Exponential attribute) (pybop.parameters.priors.Gaussian attribute) (pybop.parameters.priors.Uniform attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler property) (pybop.Uniform attribute) priors() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) problem (jax_costs.BaseJaxCost attribute) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.BaseCost attribute) (pybop.costs.base_cost.BaseCost attribute) (pybop.GITTPulseFit attribute) problem() (in module pybop.plot) (in module pybop.plot.problem) problems (pybop.MultiFittingProblem attribute) (pybop.problems.multi_fitting_problem.MultiFittingProblem attribute) process_boundary_conditions() (pybop._utils.SymbolReplacer method) (pybop.SymbolReplacer method) process_chain() (pybop.ChainProcessor method) (pybop.MultiChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) (pybop.samplers.chain_processor.MultiChainProcessor method) (pybop.samplers.chain_processor.SingleChainProcessor method) (pybop.SingleChainProcessor method) process_model() (pybop._utils.SymbolReplacer method) (pybop.SymbolReplacer method) process_symbol() (pybop._utils.SymbolReplacer method) (pybop.SymbolReplacer method) prompt_for_plotly_installation() (pybop.plot.plotly_manager.PlotlyManager method) (pybop.plot.PlotlyManager method) PSO (class in pybop) (class in pybop.optimisers.pints_optimisers) pulse_index (pybop.applications.gitt_methods.GITTFit attribute) (pybop.GITTFit attribute) pybamm() (pybop.parameters.parameter_set.ParameterSet class method) (pybop.ParameterSet class method) pybamm_model (pybop.BaseModel attribute) (pybop.ExponentialDecayModel attribute), [1] (pybop.models._exponential_decay.ExponentialDecayModel attribute), [1] (pybop.models.base_model.BaseModel attribute) (pybop.models.empirical.base_ecm.ECircuitModel attribute) (pybop.models.empirical.ECircuitModel attribute) (pybop.models.lithium_ion.base_echem.EChemBaseModel attribute) (pybop.models.lithium_ion.EChemBaseModel attribute) pybamm_solution (pybop.BaseCost property) (pybop.BaseModel property) (pybop.BaseProblem property) (pybop.costs.base_cost.BaseCost property) (pybop.models.base_model.BaseModel property) (pybop.MultiFittingProblem property) (pybop.OptimisationResult attribute) (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult property) (pybop.problems.base_problem.BaseProblem property) (pybop.problems.multi_fitting_problem.MultiFittingProblem property) pybamm_solution_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) pybop module pybop._classification module pybop._dataset module pybop._evaluation module pybop._experiment module

pybop._utils module pybop._version module pybop.applications module pybop.applications.base_method module pybop.applications.gitt_methods module pybop.applications.ocp_methods module pybop.costs module pybop.costs._likelihoods module pybop.costs._weighted_cost module pybop.costs.base_cost module pybop.costs.design_costs module pybop.costs.error_measures module pybop.costs.fitting_costs module pybop.models module pybop.models._exponential_decay module pybop.models.base_model module pybop.models.empirical module pybop.models.empirical.base_ecm module pybop.models.empirical.ecm module pybop.models.lithium_ion module pybop.models.lithium_ion.base_echem module pybop.models.lithium_ion.basic_SP_diffusion module pybop.models.lithium_ion.basic_SPM module pybop.models.lithium_ion.basic_SPMe module pybop.models.lithium_ion.echem module pybop.models.lithium_ion.weppner_huggins module pybop.observers module pybop.observers.observer module pybop.observers.unscented_kalman module pybop.optimisers module pybop.optimisers._adamw module pybop.optimisers._cost_interface module pybop.optimisers._cuckoo module pybop.optimisers._gradient_descent module pybop.optimisers._irprop_plus module pybop.optimisers._random_search module pybop.optimisers._result module pybop.optimisers._simulated_annealing module pybop.optimisers.base_optimiser module pybop.optimisers.base_pints_optimiser module pybop.optimisers.optimisation module pybop.optimisers.pints_optimisers module pybop.optimisers.scipy_optimisers module pybop.parameters module pybop.parameters.parameter module pybop.parameters.parameter_set module pybop.parameters.priors module pybop.plot module pybop.plot.contour module pybop.plot.convergence module pybop.plot.dataset module pybop.plot.nyquist module pybop.plot.parameters module pybop.plot.plotly_manager module pybop.plot.problem module pybop.plot.standard_plots module pybop.plot.voronoi module pybop.problems module pybop.problems.base_problem module pybop.problems.design_problem module pybop.problems.fitting_problem module pybop.problems.multi_fitting_problem module pybop.samplers module pybop.samplers.base_pints_sampler module pybop.samplers.base_sampler module pybop.samplers.chain_processor module pybop.samplers.mcmc_sampler module pybop.samplers.mcmc_summary module pybop.samplers.pints_samplers module

R

R0() (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion method) RandomSearch (class in pybop) (class in pybop.optimisers.pints_optimisers) RandomSearchImpl (class in pybop) (class in pybop.optimisers._random_search) RaoBlackwellACMC (class in pybop) (class in pybop.samplers.pints_samplers) reinit() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) RelativisticMCMC (class in pybop) (class in pybop.samplers.pints_samplers) remove() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) remove_brackets() (pybop.plot.standard_plots.StandardPlot static method) (pybop.plot.StandardPlot static method) reset() (pybop.Observer method) (pybop.observers.observer.Observer method) (pybop.observers.unscented_kalman.SquareRootUKF method) (pybop.observers.unscented_kalman.UnscentedKalmanFilterObserver method) (pybop.UnscentedKalmanFilterObserver method) reset_initial_value() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) result (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) results (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.GITTPulseFit attribute) rhat() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) RootMeanSquaredError (class in pybop) (class in pybop.costs.error_measures)

run() (pybop.BaseOptimiser method) (pybop.BasePintsSampler method) (pybop.BaseSampler method) (pybop.MCMCSampler method) (pybop.Optimisation method) (pybop.optimisers.base_optimiser.BaseOptimiser method) (pybop.optimisers.optimisation.Optimisation method) (pybop.samplers.base_pints_sampler.BasePintsSampler method) (pybop.samplers.base_sampler.BaseSampler method) (pybop.samplers.mcmc_sampler.MCMCSampler method) running() (pybop.AdamWImpl method) (pybop.CuckooSearchImpl method) (pybop.GradientDescentImpl method) (pybop.IRPropPlusImpl method) (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.RandomSearchImpl method) (pybop.SimulatedAnnealingImpl method) rvs() (pybop.BasePrior method) (pybop.Parameter method) (pybop.Parameters method) (pybop.parameters.parameter.Parameter method) (pybop.parameters.parameter.Parameters method) (pybop.parameters.priors.BasePrior method)

S

S (pybop.observers.unscented_kalman.SquareRootUKF attribute) sampled_logpdf (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) sampled_prior (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) sampler (pybop.BasePintsSampler attribute) (pybop.ChainProcessor attribute) (pybop.MCMCSampler attribute) (pybop.samplers.base_pints_sampler.BasePintsSampler attribute) (pybop.samplers.chain_processor.ChainProcessor attribute) (pybop.samplers.mcmc_sampler.MCMCSampler attribute) samplers (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) scale (pybop.BasePrior attribute) (pybop.Exponential attribute) (pybop.Gaussian attribute) (pybop.parameters.priors.BasePrior attribute) (pybop.parameters.priors.Exponential attribute) (pybop.parameters.priors.Gaussian attribute) (pybop.parameters.priors.Uniform attribute) (pybop.Uniform attribute) ScaledLogLikelihood (class in pybop) (class in pybop.costs._likelihoods) ScaledTransformation (class in transformations) scipy_result (pybop.OptimisationResult attribute) (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult property) scipy_result_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) SciPyDifferentialEvolution (class in pybop) (class in pybop.optimisers.scipy_optimisers) SciPyEvaluator (class in pybop) (class in pybop._evaluation) SciPyMinimize (class in pybop) (class in pybop.optimisers.scipy_optimisers) script_path (in module pybop) sensitivities (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) sensitivities_available (pybop.BaseModel property) (pybop.BaseProblem property) (pybop.models.base_model.BaseModel property) (pybop.problems.base_problem.BaseProblem property) sensitivity_analysis() (pybop.BaseCost method) (pybop.costs.base_cost.BaseCost method) SequentialJaxEvaluator (class in pybop) (class in pybop._evaluation) set_allow_infeasible_solutions() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) set_base_options() (pybop.BaseOptimiser method) (pybop.optimisers.base_optimiser.BaseOptimiser method) set_bounds() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) set_current_function() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) set_f_guessed_tracking() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_fail_gradient() (pybop.BaseCost method) (pybop.costs.base_cost.BaseCost method) set_formation_concentrations() (in module pybop.parameters.parameter_set) set_geometric_parameters() (pybop.models.lithium_ion.base_echem.EChemBaseModel method) (pybop.models.lithium_ion.EChemBaseModel method) set_hyper_parameters() (pybop.GradientDescentImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) set_initial_phase_iterations() (pybop.BaseSampler method) (pybop.samplers.base_sampler.BaseSampler method) set_initial_state() (pybop.BaseModel method) (pybop.BaseProblem method) (pybop.DesignProblem method) (pybop.FittingProblem method) (pybop.models.base_model.BaseModel method) (pybop.MultiFittingProblem method) (pybop.problems.base_problem.BaseProblem method) (pybop.problems.design_problem.DesignProblem method) (pybop.problems.fitting_problem.FittingProblem method) (pybop.problems.multi_fitting_problem.MultiFittingProblem method) set_learning_rate() (pybop.GradientDescentImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) set_margin() (pybop.Parameter method) (pybop.parameters.parameter.Parameter method) set_max_evaluations() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_max_iterations() (pybop.BasePintsOptimiser method) (pybop.BaseSampler method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) (pybop.samplers.base_sampler.BaseSampler method) set_max_unchanged_iterations() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_min_iterations() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_parallel() (pybop.BasePintsOptimiser method) (pybop.BaseSampler method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) (pybop.samplers.base_sampler.BaseSampler method) set_parameters() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) set_population_size() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method)

set_target() (pybop.BaseProblem method) (pybop.problems.base_problem.BaseProblem method) set_threshold() (pybop.BasePintsOptimiser method) (pybop.optimisers.base_pints_optimiser.BasePintsOptimiser method) set_up_for_eis() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) sig_digits (pybop.PosteriorSummary attribute) (pybop.samplers.mcmc_summary.PosteriorSummary attribute) sigma (jax_costs.JaxGaussianLogLikelihoodKnownSigma attribute) (jax_costs.JaxLogNormalLikelihood attribute) (pybop.BasePrior property) (pybop.costs._likelihoods.GaussianLogLikelihood attribute) (pybop.GaussianLogLikelihood attribute) (pybop.parameters.priors.BasePrior property) (pybop.parameters.priors.Uniform property) (pybop.Uniform property) sigma0 (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) sigma2 (jax_costs.JaxGaussianLogLikelihoodKnownSigma attribute) (jax_costs.JaxLogNormalLikelihood attribute) (pybop.costs._likelihoods.GaussianLogLikelihoodKnownSigma attribute) (pybop.GaussianLogLikelihoodKnownSigma attribute) SigmaPoint (class in pybop.observers.unscented_kalman) signal (pybop.BaseProblem attribute) (pybop.problems.base_problem.BaseProblem attribute) signif() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) simulate() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) SimulatedAnnealing (class in pybop) (class in pybop.optimisers.pints_optimisers) SimulatedAnnealingImpl (class in pybop) (class in pybop.optimisers._simulated_annealing) simulateEIS() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) simulateS1() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) single_call() (jax_costs.BaseJaxCost method) (pybop.BaseCost method) (pybop.costs.base_cost.BaseCost method) single_chain (pybop.BasePintsSampler property) (pybop.samplers.base_pints_sampler.BasePintsSampler property) SingleChainProcessor (class in pybop) (class in pybop.samplers.chain_processor) SliceDoublingMCMC (class in pybop) (class in pybop.samplers.pints_samplers) SliceRankShrinkingMCMC (class in pybop) (class in pybop.samplers.pints_samplers) SliceStepoutMCMC (class in pybop) (class in pybop.samplers.pints_samplers) SNES (class in pybop) (class in pybop.optimisers.pints_optimisers) sol (pybop.models.base_model.TimeSeriesState attribute) (pybop.TimeSeriesState attribute) solver (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) spatial_methods (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) SPDiffusion (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) SPM (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) SPMe (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) sqrtRm (pybop.observers.unscented_kalman.SquareRootUKF attribute) sqrtRp (pybop.observers.unscented_kalman.SquareRootUKF attribute) SquareRootUKF (class in pybop.observers.unscented_kalman) stack_sensitivities() (pybop.BaseCost method) (pybop.costs.base_cost.BaseCost method) StandardPlot (class in pybop.plot) (class in pybop.plot.standard_plots) StandardSubplot (class in pybop.plot) (class in pybop.plot.standard_plots) states (pybop.observers.unscented_kalman.SquareRootUKF attribute) step() (pybop.BaseModel method) (pybop.models.base_model.BaseModel method) (pybop.observers.unscented_kalman.SquareRootUKF method) step_max (pybop.IRPropPlusImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute), [1] step_min (pybop.IRPropPlusImpl attribute), [1] (pybop.optimisers._irprop_plus.IRPropPlusImpl attribute), [1] step_size (pybop.CuckooSearchImpl attribute) (pybop.optimisers._cuckoo.CuckooSearchImpl attribute) store_samples() (pybop.ChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) submesh_types (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) subplot_options (pybop.plot.standard_plots.StandardSubplot attribute) (pybop.plot.StandardSubplot attribute) summary_table() (pybop.PosteriorSummary method) (pybop.samplers.mcmc_summary.PosteriorSummary method) SumOfPower (class in pybop) (class in pybop.costs.error_measures) SumSquaredError (class in pybop) (class in pybop.costs.error_measures) surface() (in module pybop.plot) (in module pybop.plot.voronoi) SymbolReplacer (class in pybop) (class in pybop._utils)

T

t (pybop.models.base_model.TimeSeriesState attribute) (pybop.TimeSeriesState attribute) target (pybop.BaseCost property) (pybop.BaseProblem property) (pybop.costs.base_cost.BaseCost property) (pybop.problems.base_problem.BaseProblem property) target_time (pybop.costs.design_costs.GravimetricPowerDensity attribute) (pybop.costs.design_costs.VolumetricPowerDensity attribute) (pybop.GravimetricPowerDensity attribute) (pybop.VolumetricPowerDensity attribute) tau_d() (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion method) tell() (pybop.AdamWImpl method) (pybop.CuckooSearchImpl method) (pybop.GradientDescentImpl method) (pybop.IRPropPlusImpl method) (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.RandomSearchImpl method) (pybop.SimulatedAnnealingImpl method) temperature (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl property) (pybop.SimulatedAnnealingImpl property) Thevenin (class in pybop.models.empirical) (class in pybop.models.empirical.ecm) time (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) time_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property)

TimeSeriesState (class in pybop) (class in pybop.models.base_model) to_model() (base_transformation.Transformation method) to_pybamm() (pybop.parameters.parameter_set.ParameterSet class method) (pybop.ParameterSet class method) to_search() (base_transformation.Transformation method) total_runtime() (pybop.OptimisationResult method) (pybop.optimisers._result.OptimisationResult method) trace_name_width (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) trace_options (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) traces (pybop.plot.standard_plots.StandardPlot attribute) (pybop.plot.StandardPlot attribute) trajectories() (in module pybop.plot) (in module pybop.plot.standard_plots) transform_list_of_values() (pybop.CostInterface method) (pybop.optimisers._cost_interface.CostInterface method) transform_values() (pybop.CostInterface method) (pybop.optimisers._cost_interface.CostInterface method) Transformation (class in base_transformation) transformation (pybop.CostInterface property) (pybop.optimisers._cost_interface.CostInterface property) (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) transformations module true_value (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) true_value() (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) truncate_region_by_axis() (in module pybop.plot.voronoi)

U

U() (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion method) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM method) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe method) Uniform (class in pybop) (class in pybop.parameters.priors) UnitHyperCube (class in transformations) unscented_transform() (pybop.observers.unscented_kalman.SquareRootUKF static method) UnscentedKalmanFilterObserver (class in pybop) (class in pybop.observers.unscented_kalman) unset_options (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) unset_options_store (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) update() (pybop.Parameter method) (pybop.Parameters method) (pybop.parameters.parameter.Parameter method) (pybop.parameters.parameter.Parameters method) (pybop.parameters.parameter_set.ParameterSet method) (pybop.ParameterSet method)

update_accepted_sample() (pybop.ChainProcessor method) (pybop.samplers.chain_processor.ChainProcessor method) update_capacity (pybop.DesignProblem attribute) (pybop.problems.design_problem.DesignProblem attribute) upper (pybop.parameters.priors.Uniform attribute) (pybop.Uniform attribute) (transformations.UnitHyperCube attribute), [1] upper_bound (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute)

V

value (pybop.Parameter attribute) (pybop.parameters.parameter.Parameter attribute) var_pts (pybop.BaseModel property) (pybop.models.base_model.BaseModel property) variables (pybop.models.lithium_ion.basic_SP_diffusion.BaseSPDiffusion attribute) (pybop.models.lithium_ion.basic_SPM.BaseGroupedSPM attribute) (pybop.models.lithium_ion.basic_SPMe.BaseGroupedSPMe attribute) (pybop.models.lithium_ion.weppner_huggins.BaseWeppnerHuggins attribute) verbose (pybop.applications.base_method.InverseOCV attribute) (pybop.applications.gitt_methods.GITTFit attribute) (pybop.applications.gitt_methods.GITTPulseFit attribute) (pybop.applications.ocp_methods.OCPAverage attribute) (pybop.applications.ocp_methods.OCPCapacityToStoichiometry attribute) (pybop.BaseCost attribute) (pybop.BaseOptimiser attribute) (pybop.BaseProblem attribute) (pybop.costs.base_cost.BaseCost attribute) (pybop.GITTFit attribute) (pybop.GITTPulseFit attribute) (pybop.InverseOCV attribute) (pybop.OCPAverage attribute) (pybop.OCPCapacityToStoichiometry attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.problems.base_problem.BaseProblem attribute)

verbose_print_rate (pybop.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) verify() (pybop.BasePrior method) (pybop.Parameters method) (pybop.parameters.parameter.Parameters method) (pybop.parameters.priors.BasePrior method) verify_input() (base_transformation.Transformation method) verify_prediction() (pybop.BaseCost method) (pybop.costs.base_cost.BaseCost method) VolumetricEnergyDensity (class in pybop) (class in pybop.costs.design_costs) VolumetricPowerDensity (class in pybop) (class in pybop.costs.design_costs)

W

w_c (pybop.observers.unscented_kalman.SigmaPoint attribute) w_m (pybop.observers.unscented_kalman.SigmaPoint attribute) warning_patterns (pybop.DesignProblem attribute) (pybop.problems.design_problem.DesignProblem attribute) WeightedCost (class in pybop) (class in pybop.costs._weighted_cost)

weighting (pybop.costs.fitting_costs.FittingCost attribute) (pybop.FittingCost attribute) WeppnerHuggins (class in pybop.models.lithium_ion) (class in pybop.models.lithium_ion.echem) wrap_text() (pybop.plot.standard_plots.StandardPlot static method) (pybop.plot.StandardPlot static method)

X

x (pybop.applications.base_method.Interpolant attribute) (pybop.Interpolant attribute) (pybop.observers.unscented_kalman.SigmaPoint attribute) (pybop.observers.unscented_kalman.SquareRootUKF attribute) (pybop.OptimisationResult attribute) (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult attribute) (pybop.optimisers._result.OptimisationResult property) (pybop.optimisers.base_optimiser.OptimisationLog attribute) x0 (pybop.BaseOptimiser attribute) (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) (pybop.optimisers.base_optimiser.BaseOptimiser attribute) (pybop.optimisers.base_optimiser.OptimisationLog attribute) x0_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) x_best (pybop.OptimisationResult property) (pybop.optimisers._result.OptimisationResult property) (pybop.optimisers.base_optimiser.OptimisationLog attribute)

x_best() (pybop.AdamWImpl method) (pybop.CuckooSearchImpl method) (pybop.GradientDescentImpl method) (pybop.IRPropPlusImpl method) (pybop.optimisers._adamw.AdamWImpl method) (pybop.optimisers._cuckoo.CuckooSearchImpl method) (pybop.optimisers._gradient_descent.GradientDescentImpl method) (pybop.optimisers._irprop_plus.IRPropPlusImpl method) (pybop.optimisers._random_search.RandomSearchImpl method) (pybop.optimisers._simulated_annealing.SimulatedAnnealingImpl method) (pybop.RandomSearchImpl method) (pybop.SimulatedAnnealingImpl method) x_guessed() (pybop.AdamWImpl method) (pybop.optimisers._adamw.AdamWImpl method) x_search (pybop.optimisers.base_optimiser.OptimisationLog attribute) XNES (class in pybop) (class in pybop.optimisers.pints_optimisers)

Y

y (pybop.applications.base_method.Interpolant attribute) (pybop.BaseCost attribute) (pybop.costs.base_cost.BaseCost attribute) (pybop.Interpolant attribute)